RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FAM83AQ86UY5 434 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 APLFQ8IW19 511 aaPredicted RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 ZNF516Q92618 1163 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 PDCD2LQ9BRP1 358 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 FAM213AQ9BRX8 229 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 KIFC3Q9BVG8 833 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 SLC38A10Q9HBR0 1119 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 CYP39A1Q9NYL5 469 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 PPP1R1BQ9UD71 204 aaPredicted RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 TRIM33Q9UPN9 1127 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 SRCAPQ6ZRS2 3230 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 FOXO6A8MYZ6 492 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 TLR3O15455 904 aaKnown RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 LSM8O95777 96 aaKnown RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 CALB1P05937 261 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 KRT15P19012 456 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 CD58P19256 250 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 PHBP35232 272 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 DNAJC3Q13217 504 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 ZYXQ15942 572 aaKnown RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 HHATQ5VTY9 493 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 FYB2Q5VWT5 728 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 SEPT14Q6ZU15 432 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 STK32AQ8WU08 396 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 ALKBH8Q96BT7 664 aaKnown RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 BICD1Q96G01 975 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 TUBB6Q9BUF5 446 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 PXMP2Q9NR77 195 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 GINM1Q9NU53 330 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 DNPEPQ9ULA0 475 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 CORO1CQ9ULV4 474 aaPredicted RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 EFR3BQ9Y2G0 817 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 UTRNP46939 3433 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 PEX11AO75192 247 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 SMNDC1O75940 238 aaKnown RBP eCLIP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 STBD1O95210 358 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 KRT1P04264 644 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 CHRM1P11229 460 aaPredicted RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 PECAM1P16284 738 aaPredicted RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 ARSEP51690 589 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 DLGAP5Q15398 846 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 PKN2Q16513 984 aaKnown RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 TDRD10Q5VZ19 366 aaKnown RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 SPOCD1Q6ZMY3 1216 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 NIPA2Q8N8Q9 360 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 CEP170P1Q96L14 293 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 TAAR1Q96RJ0 339 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 ZNF148Q9UQR1 794 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 LRRC42Q9Y546 428 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 PCDHB4Q9Y5E5 795 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 PARP14Q460N5 1801 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 TMEM191CA6NGB0 347 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 TM9SF1O15321 606 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 LDHAP00338 332 aaKnown RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 TMEM191BP0C7N4 346 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 TROVE2P10155 538 aaKnown RBP eCLIP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 EIF2AK2P19525 551 aaKnown RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 CA4P22748 312 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 MMP8P22894 467 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 LIG4P49917 911 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 GEMIN4P57678 1058 aaKnown RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 SLFN12LQ6IEE8 588 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 RSBN1LQ6PCB5 846 aaPredicted RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 TAS1R3Q7RTX0 852 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 NLRX1Q86UT6 975 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 RBBP8NLQ8NC74 664 aaPredicted RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 SLC7A6OSQ96CW6 309 aaPredicted RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 CGRRF1Q99675 332 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 PAIP2Q9BPZ3 127 aaKnown RBP14.48□□□□□ -0.09
VPS33A-208ENST00000543633 VPS37BQ9H9H4 285 aa14.48□□□□□ -0.09
VPS33A-208ENST00000543633 hCG_1818297A0A087WSY0 165 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 NFKBIEO00221 500 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 SPAG7O75391 227 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 VNN1O95497 513 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 PTPN4P29074 926 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 CCND2P30279 289 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 ZNF132P52740 706 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 RPS6P62753 249 aaKnown RBP14.47□□□□□ -0.09
VPS33A-208ENST00000543633 GPS1Q13098 491 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 TAF11Q15544 211 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 KLHL38Q2WGJ6 581 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 POLNQ7Z5Q5 900 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 ATP11CQ8NB49 1132 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 MTMR14Q8NCE2 650 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 FAM13CQ8NE31 585 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 GMLQ99445 158 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 SH2D3AQ9BRG2 576 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 DHRS4Q9BTZ2 278 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 ZNF518BQ9C0D4 1074 aa14.47□□□□□ -0.09
VPS33A-208ENST00000543633 FHDC1Q9C0D6 1143 aaPredicted RBP14.47□□□□□ -0.09
VPS33A-208ENST00000543633 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.47□□□□□ -0.09
VPS33A-208ENST00000543633 TCRBV5S1A1TA0A578 114 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 CLRN2A0PK11 232 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 POC1B-GALNT4F8VUJ3 575 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 ATP9AO75110 1047 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 CALCAP01258 141 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 PSAPP07602 524 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 TNNI1P19237 187 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 PIGHQ14442 188 aaPredicted RBP14.46□□□□□ -0.09
VPS33A-208ENST00000543633 TBC1D10BQ4KMP7 808 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms