RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 FAM213AQ9BRX8 229 aa13.03□□□□□ -0.32
PTPN6-220ENST00000543115 SLITRK6Q9H5Y7 841 aa13.03□□□□□ -0.32
PTPN6-220ENST00000543115 NDRG2Q9UN36 371 aaKnown RBP13.03□□□□□ -0.32
PTPN6-220ENST00000543115 ANK1P16157 1881 aa13.03□□□□□ -0.32
PTPN6-220ENST00000543115 GOLGA8IPA6NC78 632 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 GOLGA8JA6NMD2 632 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 KPNA7A9QM74 516 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 ARNTLO00327 626 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 LAMTOR5O43504 91 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 PRPF6O94906 941 aaKnown RBP13.02□□□□□ -0.33
PTPN6-220ENST00000543115 IL18RAPO95256 599 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 GABRR2P28476 465 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 POSTNQ15063 836 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 MGAT5BQ3V5L5 792 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 MFSD6LQ8IWD5 586 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 BRSK2Q8IWQ3 736 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 LINC00301Q8NCQ3 95 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 KCNG4Q8TDN1 519 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 DEPDC1BQ8WUY9 529 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 IRF7Q92985 503 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 HPS3Q969F9 1004 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 LRRC3BQ96PB8 259 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 NELL2Q99435 816 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 SEPT5Q99719 369 aaPredicted RBP13.02□□□□□ -0.33
PTPN6-220ENST00000543115 GPR88Q9GZN0 384 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 ATXN3LQ9H3M9 355 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 SEMA4AQ9H3S1 761 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 ZSCAN16Q9H4T2 348 aaPredicted RBP13.02□□□□□ -0.33
PTPN6-220ENST00000543115 TRPV5Q9NQA5 729 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 PANK4Q9NVE7 773 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 HSFX1Q9UBD0 423 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 DSEQ9UL01 958 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 EXOC7Q9UPT5 735 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 ASB3Q9Y575 518 aa13.02□□□□□ -0.33
PTPN6-220ENST00000543115 PTPRZ1P23471 2315 aaPredicted RBP13.02□□□□□ -0.33
PTPN6-220ENST00000543115 ZFHX2Q9C0A1 2572 aaPredicted RBP13.02□□□□□ -0.33
PTPN6-220ENST00000543115 RIF1Q5UIP0 2472 aaKnown RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 TULP1O00294 542 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 ZNF263O14978 683 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 ITGB3P05106 788 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 GARTP22102 1010 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 POLR2BP30876 1174 aaKnown RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 RPS9P46781 194 aaKnown RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 CYP4F8P98187 520 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 TFAMQ00059 246 aaKnown RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 CSTF1Q05048 431 aaKnown RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 STK38Q15208 465 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 E2F4Q16254 413 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 SV2CQ496J9 727 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 TSSK4Q6SA08 328 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 METTL23Q86XA0 190 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 NT5DC4Q86YG4 428 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 ARID3BQ8IVW6 561 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 C1orf127Q8N9H9 656 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 CXorf38Q8TB03 319 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 GIPC2Q8TF65 315 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 PCIF1Q9H4Z3 704 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 IL21Q9HBE4 155 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 TMLHEQ9NVH6 421 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 RBAKQ9NYW8 714 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
PTPN6-220ENST00000543115 FBXO4Q9UKT5 387 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 PIAS3Q9Y6X2 628 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 PATJQ8NI35 1801 aa13.01□□□□□ -0.33
PTPN6-220ENST00000543115 FAM186AA6NE01 2351 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 MIA3Q5JRA6 1907 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 MAN2B1O00754 1011 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 NCAM2O15394 837 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 MAGEA9P43362 315 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 SOX9P48436 509 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 TUFMP49411 452 aaKnown RBP13□□□□□ -0.33
PTPN6-220ENST00000543115 FCHO2Q0JRZ9 810 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 MTAPQ13126 283 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 ALCAMQ13740 583 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 ZNF528Q3MIS6 628 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 GPR158Q5T848 1215 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 ITIH5Q86UX2 942 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 THEM5Q8N1Q8 247 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 PDCL2Q8N4E4 241 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 SUMF1Q8NBK3 374 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 STKLD1Q8NE28 680 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 FAM200AQ8TCP9 573 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 SPPL2BQ8TCT7 592 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 FAM3CQ92520 227 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 ZNF560Q96MR9 790 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 ABI2Q9NYB9 513 aaPredicted RBP13□□□□□ -0.33
PTPN6-220ENST00000543115 L1RE1Q9UN81 338 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 AGAP1Q9UPQ3 857 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 MRPS17Q9Y2R5 130 aaKnown RBP13□□□□□ -0.33
PTPN6-220ENST00000543115 CFAP54Q96N23 3096 aa13□□□□□ -0.33
PTPN6-220ENST00000543115 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 SLC38A8A6NNN8 435 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 SPTLC2O15270 562 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 CHADO15335 359 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 HCRTO43612 131 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms