RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 SMG8Q8ND04 991 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 NSUN7Q8NE18 718 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 PI4K2BQ8TCG2 481 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 KIF1BPQ96EK5 621 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 SGF29Q96ES7 293 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 FAM167AQ96KS9 214 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 GCNAQ96QF7 691 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 MTMR9Q96QG7 549 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 CCNL2Q96S94 520 aaPredicted RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 SEC62Q99442 399 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 FAM83CQ9BQN1 747 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 PAAF1Q9BRP4 392 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 LY9Q9HBG7 655 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 NRBP2Q9NSY0 501 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 KLK14Q9P0G3 267 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 CALCOCO1Q9P1Z2 691 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 VPS4AQ9UN37 437 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 SAMM50Q9Y512 469 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 HES2Q9Y543 173 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 UBIAD1Q9Y5Z9 338 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 NFASCO94856 1347 aa3.64□□□□□ -1.83
CHD4-209ENST00000542717 TDRD15B5MCY1 1934 aaKnown RBP3.64□□□□□ -1.83
CHD4-209ENST00000542717 IGKV6D-21A0A0A0MT36 114 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 IGHV1OR15-9A0A0B4J2B8 117 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 PNMA6FA0A0J9YX94 578 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ANTXRLA6NF34 631 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 WIPF3A6NGB9 483 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 SGK1O00141 431 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 CBX4O00257 560 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 LAD1O00515 517 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 TRAPPC3O43617 180 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 MARCH6O60337 910 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 USP12O75317 370 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 RECQL4O94761 1208 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ERLIN2O94905 339 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ABLIM3O94929 683 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 SEC24AO95486 1093 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 NADKO95544 446 aaPredicted RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 CCNE2O96020 404 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 PSAPP07602 524 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 CPB1P15086 417 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 HOXB4P17483 251 aaPredicted RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 ATP4AP20648 1035 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ABCB4P21439 1286 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 AKAP5P24588 427 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 TKTP29401 623 aaKnown RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 AVPR1AP37288 418 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ALDH1A3P47895 512 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 CSNK1EP49674 416 aaKnown RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 EPHB3P54753 998 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 HAND2P61296 217 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 CYP4F8P98187 520 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 PLD1Q13393 1074 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 DRP2Q13474 957 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 PDGFRLQ15198 375 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 TEAD4Q15561 434 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 TAF12Q16514 161 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ZXDCQ2QGD7 858 aaPredicted RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 PROX2Q3B8N5 592 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 MTERF2Q49AM1 385 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 CCDC178Q5BJE1 867 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 UBXN11Q5T124 520 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 FOXR1Q6PIV2 292 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ABHD15Q6UXT9 468 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 TAOK1Q7L7X3 1001 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 C12orf40Q86WS4 652 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 KSR1Q8IVT5 923 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 MIER1Q8N108 512 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 LINC01465Q8N7H1 131 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 KBTBD3Q8NAB2 608 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 SNX19Q92543 992 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ESR2Q92731 530 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 MARVELD3Q96A59 401 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ERLEC1Q96DZ1 483 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 DDX27Q96GQ7 796 aaKnown RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 ZNF419Q96HQ0 510 aaPredicted RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 MXRA8Q9BRK3 442 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 NIFKQ9BYG3 293 aaKnown RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 TASP1Q9H6P5 420 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 PRKRIP1Q9H875 184 aaPredicted RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 ECT2Q9H8V3 914 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ZDHHC4Q9NPG8 344 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 GEMIN8Q9NWZ8 242 aaKnown RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 DONSONQ9NYP3 566 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 SUCLA2Q9P2R7 463 aaPredicted RBP3.63□□□□□ -1.83
CHD4-209ENST00000542717 GABBR1Q9UBS5 961 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 ANAPC2Q9UJX6 822 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 TBX20Q9UMR3 447 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 GIT1Q9Y2X7 761 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 PCDHB1Q9Y5F3 818 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 BACE2Q9Y5Z0 518 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 BOD1L1Q8NFC6 3051 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 UBE4BO95155 1302 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 LRBAP50851 2863 aa3.63□□□□□ -1.83
CHD4-209ENST00000542717 PTPRDP23468 1912 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 MTORP42345 2549 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 E2F8A0AVK6 867 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 ARHGAP10A1A4S6 786 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 H7C4K7 107 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 I3L4J1 428 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms