RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 ZFYVE19Q96K21 471 aa13.2□□□□□ -0.3
COPS7A-213ENST00000542150 SENP8Q96LD8 212 aa13.2□□□□□ -0.3
COPS7A-213ENST00000542150 PLIN2Q99541 437 aa13.2□□□□□ -0.3
COPS7A-213ENST00000542150 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
COPS7A-213ENST00000542150 SEMA4GQ9NTN9 838 aa13.2□□□□□ -0.3
COPS7A-213ENST00000542150 GTSE1Q9NYZ3 720 aa13.2□□□□□ -0.3
COPS7A-213ENST00000542150 LARSQ9P2J5 1176 aaKnown RBP13.2□□□□□ -0.3
COPS7A-213ENST00000542150 CPSF3Q9UKF6 684 aaKnown RBP13.2□□□□□ -0.3
COPS7A-213ENST00000542150 RAB23Q9ULC3 237 aa13.2□□□□□ -0.3
COPS7A-213ENST00000542150 TBX20Q9UMR3 447 aa13.2□□□□□ -0.3
COPS7A-213ENST00000542150 H0YCG3 227 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 PRAMEF12O95522 483 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 ATF6P18850 670 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 SCP2P22307 547 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 GABRR2P28476 465 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 ZNF131P52739 623 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 PPP2R3AQ06190 1150 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 GPR158Q5T848 1215 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 PRR23CQ6ZRP0 262 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 PRR23BQ6ZRT6 265 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 SYNPOQ8N3V7 929 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 CHFRQ96EP1 664 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 ATXN3LQ9H3M9 355 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 TASP1Q9H6P5 420 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 PPP4R2Q9NY27 417 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
COPS7A-213ENST00000542150 TICRRQ7Z2Z1 1910 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.18□□□□□ -0.3
COPS7A-213ENST00000542150 TM4SF5O14894 197 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 SLC26A4O43511 780 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 XPOTO43592 962 aaKnown RBP13.18□□□□□ -0.3
COPS7A-213ENST00000542150 GDF9O60383 454 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 FGF19O95750 216 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 TNK2Q07912 1038 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
COPS7A-213ENST00000542150 ARL6IP4Q66PJ3 421 aaKnown RBP13.18□□□□□ -0.3
COPS7A-213ENST00000542150 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 TMEM150AQ86TG1 271 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 LRRTM3Q86VH5 581 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 WDR5BQ86VZ2 330 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 CD302Q8IX05 232 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 LPIN3Q9BQK8 851 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 SLC46A2Q9BY10 475 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
COPS7A-213ENST00000542150 BLOC1S4Q9NUP1 217 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 DERAQ9Y315 318 aa13.18□□□□□ -0.3
COPS7A-213ENST00000542150 CITO14578 2027 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 VWA3AA6NCI4 1184 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 NFICP08651 508 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 ODC1P11926 461 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
COPS7A-213ENST00000542150 TUFMP49411 452 aaKnown RBP13.17□□□□□ -0.3
COPS7A-213ENST00000542150 LIG4P49917 911 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 GTF2BQ00403 316 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 PLCB2Q00722 1185 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 PON2Q15165 354 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 PPM1JQ5JR12 505 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 ARMCX5Q6P1M9 558 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 PKN3Q6P5Z2 889 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 ITIH5Q86UX2 942 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 FAM160A2Q8N612 972 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-213ENST00000542150 BPIFB1Q8TDL5 484 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 FAM83CQ9BQN1 747 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 CCSER1Q9C0I3 900 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
COPS7A-213ENST00000542150 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
COPS7A-213ENST00000542150 CCDC163A0A0D9SF12 145 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 OTOL1A6NHN0 477 aaPredicted RBP13.16□□□□□ -0.3
COPS7A-213ENST00000542150 ANKRD63C9JTQ0 380 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 HNRNPDLO14979 420 aaKnown RBP13.16□□□□□ -0.3
COPS7A-213ENST00000542150 EXTL3O43909 919 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 FOXD2O60548 495 aaPredicted RBP13.16□□□□□ -0.3
COPS7A-213ENST00000542150 F11P03951 625 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
COPS7A-213ENST00000542150 HMGA1P17096 107 aaKnown RBP13.16□□□□□ -0.3
COPS7A-213ENST00000542150 CYP4F8P98187 520 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 ARHGAP15Q53QZ3 475 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 TMEM196Q5HYL7 178 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
COPS7A-213ENST00000542150 BICD1Q96G01 975 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 AK8Q96MA6 479 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 SMG9Q9H0W8 520 aaKnown RBP13.16□□□□□ -0.3
COPS7A-213ENST00000542150 ASB7Q9H672 318 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 PARVGQ9HBI0 331 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 HPS4Q9NQG7 708 aa13.16□□□□□ -0.3
COPS7A-213ENST00000542150 DPYSL4O14531 572 aa13.15□□□□□ -0.3
COPS7A-213ENST00000542150 TRAK2O60296 914 aa13.15□□□□□ -0.3
COPS7A-213ENST00000542150 CDC25CP30307 473 aa13.15□□□□□ -0.3
COPS7A-213ENST00000542150 RAP1GAPP47736 663 aa13.15□□□□□ -0.3
COPS7A-213ENST00000542150 MCM2P49736 904 aa13.15□□□□□ -0.3
COPS7A-213ENST00000542150 LIMK1P53667 647 aa13.15□□□□□ -0.3
COPS7A-213ENST00000542150 POU5F1Q01860 360 aaKnown RBP13.15□□□□□ -0.3
COPS7A-213ENST00000542150 SMARCB1Q12824 385 aa13.15□□□□□ -0.3
COPS7A-213ENST00000542150 TMEM132DQ14C87 1099 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms