RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 NLGN2Q8NFZ4 835 aa15.88■□□□□ 0.13
VARS2-211ENST00000541562 ANKEF1Q9NU02 776 aa15.88■□□□□ 0.13
VARS2-211ENST00000541562 CHMP2BQ9UQN3 213 aa15.88■□□□□ 0.13
VARS2-211ENST00000541562 HES2Q9Y543 173 aa15.88■□□□□ 0.13
VARS2-211ENST00000541562 CCDC195A0A1B0GUA6 201 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 SPDYE16A6NNV3 312 aaPredicted RBP15.87■□□□□ 0.13
VARS2-211ENST00000541562 IGF2BP3O00425 579 aaKnown RBP eCLIP15.87■□□□□ 0.13
VARS2-211ENST00000541562 FAM155BO75949 473 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 PROSCO94903 275 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 FOXN2P32314 431 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 MMP13P45452 471 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 SLMAPQ14BN4 828 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 ZNF568Q3ZCX4 644 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 TRPM8Q7Z2W7 1104 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 USP37Q86T82 979 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 RFX6Q8HWS3 928 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 PARP9Q8IXQ6 854 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 ABRAQ8N0Z2 381 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 PIWIL1Q96J94 861 aaKnown RBP15.87■□□□□ 0.13
VARS2-211ENST00000541562 ZNF317Q96PQ6 595 aaPredicted RBP15.87■□□□□ 0.13
VARS2-211ENST00000541562 METTL5Q9NRN9 209 aaKnown RBP15.87■□□□□ 0.13
VARS2-211ENST00000541562 PSMC1P62191 440 aaKnown RBP15.87■□□□□ 0.13
VARS2-211ENST00000541562 FKBP1AP62942 108 aaKnown RBP15.87■□□□□ 0.13
VARS2-211ENST00000541562 MYO1EQ12965 1108 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 TFDP1Q14186 410 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 ZNF699Q32M78 642 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 XKR3Q5GH77 459 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 TAOK1Q7L7X3 1001 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 AGBL3Q8NEM8 1001 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 KLHL29Q96CT2 875 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 THSD7AQ9UPZ6 1657 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 UBE4BO95155 1302 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 SCYL3Q8IZE3 742 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 FEZF2Q8TBJ5 459 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 STAMBPL1Q96FJ0 436 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 PITPNM3Q9BZ71 974 aa15.87■□□□□ 0.13
VARS2-211ENST00000541562 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
VARS2-211ENST00000541562 STBD1O95210 358 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 KITP10721 976 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 RPA3P35244 121 aaPredicted RBP15.86■□□□□ 0.13
VARS2-211ENST00000541562 C6orf89Q6UWU4 347 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 VSIG1Q86XK7 387 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 ACTL9Q8TC94 416 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 TWNKQ96RR1 684 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 SMYD3Q9H7B4 428 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 HOMER3Q9NSC5 361 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 MYO18AQ92614 2054 aaKnown RBP15.86■□□□□ 0.13
VARS2-211ENST00000541562 FSCN2O14926 492 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 GMPRP36959 345 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 CCDC89Q8N998 374 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 CFAP36Q96G28 342 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 HEXIM2Q96MH2 286 aaKnown RBP15.86■□□□□ 0.13
VARS2-211ENST00000541562 PLCD4Q9BRC7 762 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 NGRNQ9NPE2 291 aaKnown RBP15.86■□□□□ 0.13
VARS2-211ENST00000541562 MARCOQ9UEW3 520 aaPredicted RBP15.86■□□□□ 0.13
VARS2-211ENST00000541562 CCDC78A2IDD5 438 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 IVDP26440 423 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 IL1R2P27930 398 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 OTUD4Q01804 1114 aaKnown RBP15.86■□□□□ 0.13
VARS2-211ENST00000541562 ZNF252P-AS1Q0IIN9 211 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 SNCBQ16143 134 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 NBPF20Q3BBV1 942 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 MSS51Q4VC12 460 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 MON1BQ7L1V2 547 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 FAM228AQ86W67 206 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 CCT6BQ92526 530 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 FAM49AQ9H0Q0 323 aaPredicted RBP15.86■□□□□ 0.13
VARS2-211ENST00000541562 IL1RAPL1Q9NZN1 696 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 PGAP2Q9UHJ9 254 aa15.86■□□□□ 0.13
VARS2-211ENST00000541562 CBX6O95503 412 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 ITGB3P05106 788 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 CPA2P48052 419 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 IRX3P78415 501 aaPredicted RBP15.85■□□□□ 0.13
VARS2-211ENST00000541562 TRIM68Q6AZZ1 485 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 SEC14L1Q92503 715 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 NDRG1Q92597 394 aaKnown RBP15.85■□□□□ 0.13
VARS2-211ENST00000541562 CAMKK2Q96RR4 588 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 FAM167BQ9BTA0 163 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 ACSS2Q9NR19 701 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 HAO1Q9UJM8 370 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 AKT3Q9Y243 479 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 IRF6O14896 467 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 AGTP01019 485 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 NFICP08651 508 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 ACO1P21399 889 aaKnown RBP15.85■□□□□ 0.13
VARS2-211ENST00000541562 KIAA0319LQ8IZA0 1049 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 FITM2Q8N6M3 262 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 KCTD6Q8NC69 237 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 PCYT2Q99447 389 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 NPHS2Q9NP85 383 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 ARHGAP28Q9P2N2 729 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 CACNG4Q9UBN1 327 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 PARP2Q9UGN5 583 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 CYTH4Q9UIA0 394 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 PRKCBP05771 671 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 ZNF286BP0CG31 522 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 ATXN1P54253 815 aaKnown RBP15.85■□□□□ 0.13
VARS2-211ENST00000541562 YWHAGP61981 247 aaKnown RBP eCLIP15.85■□□□□ 0.13
VARS2-211ENST00000541562 CCDC142Q17RM4 750 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 PPP1R21Q6ZMI0 780 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms