RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CER1O95813 267 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 CDK4P11802 303 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 YWHABP31946 246 aaKnown RBP10.38□□□□□ -0.75
YBX3-211ENST00000541351 GJA4P35212 333 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 BRCC3P46736 316 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 YARSP54577 528 aaKnown RBP10.38□□□□□ -0.75
YBX3-211ENST00000541351 ZNF33AQ06730 810 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 MRPL58Q14197 206 aaKnown RBP10.38□□□□□ -0.75
YBX3-211ENST00000541351 NAB2Q15742 525 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 RTN1Q16799 776 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 DCAF4L1Q3SXM0 396 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 Q4G0T1 1027 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 XKR9Q5GH70 373 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 EOGTQ5NDL2 527 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 STXBP5Q5T5C0 1151 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 BROXQ5VW32 411 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 PPP4R3CPQ6ZMV5 832 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 TMPRSS12Q86WS5 348 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 GPIHBP1Q8IV16 184 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 C4orf19Q8IY42 314 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 CMTM8Q8IZV2 173 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 DAGLBQ8NCG7 672 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 CCDC148Q8NFR7 591 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 USP33Q8TEY7 942 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 CHFRQ96EP1 664 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 LRRC3Q9BY71 257 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 SLKQ9H2G2 1235 aaPredicted RBP10.38□□□□□ -0.75
YBX3-211ENST00000541351 HSFX1Q9UBD0 423 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 HEMK1Q9Y5R4 338 aaPredicted RBP10.38□□□□□ -0.75
YBX3-211ENST00000541351 NUP210Q8TEM1 1887 aaPredicted RBP10.38□□□□□ -0.75
YBX3-211ENST00000541351 ATG2BQ96BY7 2078 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 GOLGA4Q13439 2230 aaKnown RBP10.37□□□□□ -0.75
YBX3-211ENST00000541351 GON4LQ3T8J9 2241 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 I3L4J1 428 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 CBFA2T3O75081 653 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 DGAT1O75907 488 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 PRAMEF12O95522 483 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 RPL9P32969 192 aaKnown RBP10.37□□□□□ -0.75
YBX3-211ENST00000541351 CXADRP78310 365 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 CAMK2BQ13554 666 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 WDR45BQ5MNZ6 344 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 GAREM2Q75VX8 874 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 DNAJB7Q7Z6W7 309 aaPredicted RBP10.37□□□□□ -0.75
YBX3-211ENST00000541351 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 CDR2LQ86X02 465 aaPredicted RBP10.37□□□□□ -0.75
YBX3-211ENST00000541351 RGL4Q8IZJ4 473 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 BEST2Q8NFU1 509 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 RLN3Q8WXF3 142 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 FOXJ1Q92949 421 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 PPP1R10Q96QC0 940 aaKnown RBP10.37□□□□□ -0.75
YBX3-211ENST00000541351 C2orf40Q9H1Z8 148 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 ECT2Q9H8V3 914 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 BMP2KQ9NSY1 1161 aaPredicted RBP10.37□□□□□ -0.75
YBX3-211ENST00000541351 TDP1Q9NUW8 608 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 IL17BQ9UHF5 180 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 PTPRQQ9UMZ3 2332 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 AK5Q9Y6K8 562 aa10.37□□□□□ -0.75
YBX3-211ENST00000541351 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 PODXLO00592 558 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 B4GALT5O43286 388 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 ZNF217O75362 1048 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 DKK1O94907 266 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 MCM4P33991 863 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 IFNAR2P48551 515 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 TUFMP49411 452 aaKnown RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 YWHAHQ04917 246 aaPredicted RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 CAPSQ13938 189 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 SMAD1Q15797 465 aaKnown RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 PFKFB3Q16875 520 aaPredicted RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 FAM187BQ17R55 369 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 MAP7D1Q3KQU3 841 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 PKDCCQ504Y2 493 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 TRIM68Q6AZZ1 485 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 B3GNT9Q6UX72 402 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 RNF19BQ6ZMZ0 732 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 ZNF574Q6ZN55 896 aaPredicted RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 USP37Q86T82 979 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 SNIP1Q8TAD8 396 aaKnown RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 ZSWIM4Q9H7M6 989 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 FBRSL1Q9HCM7 1045 aaKnown RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 FSCN3Q9NQT6 498 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 GDAQ9Y2T3 454 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 PCDHGB2Q9Y5G2 931 aa10.36□□□□□ -0.75
YBX3-211ENST00000541351 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 SPTAN1Q13813 2472 aaKnown RBP10.36□□□□□ -0.75
YBX3-211ENST00000541351 LRRIQ4A6NIV6 560 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 OR6C75A6NL08 312 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 TNFSF14O43557 240 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 GP1BBP13224 206 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 ACTN2P35609 894 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 AKAP17AQ02040 695 aaKnown RBP10.35□□□□□ -0.75
YBX3-211ENST00000541351 SEMG2Q02383 582 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 DUSP4Q13115 394 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 PRPF4BQ13523 1007 aaKnown RBP10.35□□□□□ -0.75
YBX3-211ENST00000541351 SERINC3Q13530 473 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 ZNF268Q14587 947 aaPredicted RBP10.35□□□□□ -0.75
YBX3-211ENST00000541351 INAVAQ3KP66 663 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 COLEC12Q5KU26 742 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms