RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ZSCAN5CA6NGD5 496 aaPredicted RBP11.03□□□□□ -0.64
CHFR-219ENST00000541341 PMM2O15305 246 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 EDIL3O43854 480 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 TLL1O43897 1013 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 CAND2O75155 1236 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 CDH16O75309 829 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 ECEL1O95672 775 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 OAS1P00973 400 aaKnown RBP11.03□□□□□ -0.64
CHFR-219ENST00000541341 ZNF286BP0CG31 522 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 BMP1P13497 986 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 KRT13P13646 458 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 CCNB1P14635 433 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 EIF2AK2P19525 551 aaKnown RBP11.03□□□□□ -0.64
CHFR-219ENST00000541341 MSH2P43246 934 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 GPC5P78333 572 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 DEFB103AP81534 67 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 BLMHQ13867 455 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 PGM5Q15124 567 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 CNGA2Q16280 664 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 QPCTQ16769 361 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 C11orf91Q3C1V1 193 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 PCNX4Q63HM2 1172 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 XRRA1Q6P2D8 792 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 EPM2AIP1Q7L775 607 aaPredicted RBP11.03□□□□□ -0.64
CHFR-219ENST00000541341 RELL1Q8IUW5 271 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 HERC6Q8IVU3 1022 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 ARHGAP24Q8N264 748 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 SLC35G2Q8TBE7 412 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 NSUN6Q8TEA1 469 aaKnown RBP11.03□□□□□ -0.64
CHFR-219ENST00000541341 CKAP2Q8WWK9 683 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 DTNBP1Q96EV8 351 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 TTC25Q96NG3 672 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 RMDN3Q96TC7 470 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 POLR3CQ9BUI4 534 aaPredicted RBP11.03□□□□□ -0.64
CHFR-219ENST00000541341 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 SMARCAL1Q9NZC9 954 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 GCNT4Q9P109 453 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 UVRAGQ9P2Y5 699 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
CHFR-219ENST00000541341 TLDC2A0PJX2 215 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 A6NJR5 290 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 RIPK2O43353 540 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 STAM2O75886 525 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 ZWINTO95229 277 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 NR3C1P04150 777 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 SSBP05455 408 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHFR-219ENST00000541341 MMP3P08254 477 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 CYP11B2P19099 503 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 STX2P32856 288 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 CIITAP33076 1130 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 SSR1P43307 286 aaKnown RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 DNA2P51530 1060 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 PLTPP55058 493 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 ENPEPQ07075 957 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 ARHGAP1Q07960 439 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 MYO1EQ12965 1108 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 BFSP2Q13515 415 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 SLC29A2Q14542 456 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 E2F5Q15329 346 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 PDCD2Q16342 344 aaPredicted RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 SGSM1Q2NKQ1 1148 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 Q4G0T1 1027 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 TCERG1LQ5VWI1 586 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 RGS9BPQ6ZS82 235 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 TBC1D1Q86TI0 1168 aaPredicted RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 VSIG10LQ86VR7 867 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 SESTD1Q86VW0 696 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 SLC9A9Q8IVB4 645 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 LRRC34Q8IZ02 419 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 DHX38Q92620 1227 aaKnown RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 SPDL1Q96EA4 605 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 FAXDC2Q96IV6 333 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 SLC9A7Q96T83 725 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 MPHOSPH6Q99547 160 aaKnown RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 DPH5Q9H2P9 285 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 EPHX3Q9H6B9 360 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 LRRC19Q9H756 370 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 SAR1AQ9NR31 198 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 CNOT8Q9UFF9 292 aaKnown RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 LGALS13Q9UHV8 139 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 SMG5Q9UPR3 1016 aaKnown RBP11.02□□□□□ -0.65
CHFR-219ENST00000541341 KIAA1024Q9UPX6 916 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 STARD13Q9Y3M8 1113 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 USH1CQ9Y6N9 552 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.65
CHFR-219ENST00000541341 C5orf42Q9H799 3197 aa11.01□□□□□ -0.65
CHFR-219ENST00000541341 CCDC189A1A4V9 331 aa11.01□□□□□ -0.65
CHFR-219ENST00000541341 FAM86C2PA6NEL3 165 aa11.01□□□□□ -0.65
CHFR-219ENST00000541341 DDX3YO15523 660 aaKnown RBP11.01□□□□□ -0.65
CHFR-219ENST00000541341 THAP12O43422 761 aa11.01□□□□□ -0.65
CHFR-219ENST00000541341 FESP07332 822 aa11.01□□□□□ -0.65
CHFR-219ENST00000541341 NR3C2P08235 984 aa11.01□□□□□ -0.65
CHFR-219ENST00000541341 PFKMP08237 780 aa11.01□□□□□ -0.65
CHFR-219ENST00000541341 ABHD2P08910 425 aa11.01□□□□□ -0.65
CHFR-219ENST00000541341 MAPTP10636 758 aaKnown RBP11.01□□□□□ -0.65
CHFR-219ENST00000541341 MYCLP12524 364 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms