RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ADSSL1Q8N142 457 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 TMC2Q8TDI7 906 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 GBP4Q96PP9 640 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 MMS19Q96T76 1030 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 TSG101Q99816 390 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 RTP3Q9BQQ7 232 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 L1RE1Q9UN81 338 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 NR2E1Q9Y466 385 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 CLUHO75153 1309 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 TRIM49BA6NDI0 452 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 C2CD4DB7Z1M9 353 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 CETN3O15182 167 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 MAPK13O15264 365 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 LRG1P02750 347 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 C4BPAP04003 597 aaKnown RBP9.91□□□□□ -0.82
SNHG1-215ENST00000540904 TRIM49P0CI25 452 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 TRIM49CP0CI26 452 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 BMP6P22004 513 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 AP3M2P53677 418 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 MYL6P60660 151 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 TNNC1P63316 161 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 CLDN10P78369 228 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 DUSP4Q13115 394 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 GPR17Q13304 367 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 NCOA4Q13772 614 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 MORC3Q14149 939 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 SOWAHAQ2M3V2 549 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 WDR72Q3MJ13 1102 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 SLC39A12Q504Y0 691 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 INTS8Q75QN2 995 aaKnown RBP9.91□□□□□ -0.82
SNHG1-215ENST00000540904 RTL10Q7L3V2 364 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 RNF135Q8IUD6 432 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 TCEAL8Q8IYN2 117 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 ADGRF2Q8IZF7 708 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 TOP6BLQ8N6T0 577 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 TDRD5Q8NAT2 981 aaKnown RBP9.91□□□□□ -0.82
SNHG1-215ENST00000540904 ATAD1Q8NBU5 361 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.822e-18■■□□□ 14.4
SNHG1-215ENST00000540904 DHTKD1Q96HY7 919 aaPredicted RBP9.91□□□□□ -0.82
SNHG1-215ENST00000540904 RHOBTB2Q9BYZ6 727 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 ZCWPW1Q9H0M4 648 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 WDR6Q9NNW5 1121 aaKnown RBP9.91□□□□□ -0.82
SNHG1-215ENST00000540904 LMBRD1Q9NUN5 540 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 HCFC1R1Q9NWW0 138 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 DDX43Q9NXZ2 648 aaKnown RBP9.91□□□□□ -0.82
SNHG1-215ENST00000540904 KIAA1468Q9P260 1216 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 INSL5Q9Y5Q6 135 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 PLXNA3P51805 1871 aa9.91□□□□□ -0.82
SNHG1-215ENST00000540904 ANK1P16157 1881 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 MTMR11A4FU01 709 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 PPP1R3GB7ZBB8 358 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 IKBKBO14920 756 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 PAPLNO95428 1278 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 VNN1O95497 513 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 VNN2O95498 520 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 EPB41P11171 864 aaKnown RBP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 FSHRP23945 695 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 ACAT1P24752 427 aaKnown RBP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 CCNE1P24864 410 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 ATICP31939 592 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 GBP2P32456 591 aaPredicted RBP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 PPP1R2P41236 205 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 GCLMP48507 274 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 NTHL1P78549 312 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 FKBP3Q00688 224 aaKnown RBP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 MYL7Q01449 175 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 TSPY1Q01534 308 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 LRRC63Q05C16 580 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 TWF1Q12792 350 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 C1orf220Q5T0J3 134 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 SV2AQ7L0J3 742 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 GET4Q7L5D6 327 aaPredicted RBP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 OTOP3Q7RTS5 596 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 LRRTM3Q86VH5 581 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 TMEM86AQ8N2M4 240 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 TTC9BQ8N6N2 239 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 NELFBQ8WX92 580 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 SYAP1Q96A49 352 aaPredicted RBP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 ELMO3Q96BJ8 720 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 ACSF2Q96CM8 615 aaPredicted RBP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 XYLT2Q9H1B5 865 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 CRISPLD1Q9H336 500 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 CLSTN2Q9H4D0 955 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 MMRN2Q9H8L6 949 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 NXF1Q9UBU9 619 aaKnown RBP9.9□□□□□ -0.82
SNHG1-215ENST00000540904 MUTYHQ9UIF7 546 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 MAFFQ9ULX9 164 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 CTNND2Q9UQB3 1225 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 USTQ9Y2C2 406 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 SLC27A5Q9Y2P5 690 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 YIPF1Q9Y548 306 aa9.9□□□□□ -0.82
SNHG1-215ENST00000540904 GOLGA6L22H0YM25 854 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 HCRTO43612 131 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 N4BP1O75113 896 aaKnown RBP9.89□□□□□ -0.83
SNHG1-215ENST00000540904 SOAT2O75908 522 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 RHOP08100 348 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 POU2F2P09086 479 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 PDGFRBP09619 1106 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 PCSK1P29120 753 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms