RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ATAD1Q8NBU5 361 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 OR10T2Q8NGX3 314 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 RIN3Q8TB24 985 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 ZC3H10Q96K80 434 aaKnown RBP7.95□□□□□ -1.14
YBX3-209ENST00000540747 PGLYRP2Q96PD5 576 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 TMEM209Q96SK2 561 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 FAM83CQ9BQN1 747 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 SLITRK6Q9H5Y7 841 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 TASP1Q9H6P5 420 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 HPS4Q9NQG7 708 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 ANGPTL2Q9UKU9 493 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 UBQLN1Q9UMX0 589 aaKnown RBP7.95□□□□□ -1.14
YBX3-209ENST00000540747 WASF3Q9UPY6 502 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 DNM3Q9UQ16 869 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 STK24Q9Y6E0 443 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 RALGAPA1Q6GYQ0 2036 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 FREM2Q5SZK8 3169 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 WDFY3Q8IZQ1 3526 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 ANO9A1A5B4 782 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 OTOL1A6NHN0 477 aaPredicted RBP7.94□□□□□ -1.14
YBX3-209ENST00000540747 SFI1A8K8P3 1242 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 TRDMT1O14717 391 aaKnown RBP7.94□□□□□ -1.14
YBX3-209ENST00000540747 FGF19O95750 216 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 HARSP12081 509 aaKnown RBP7.94□□□□□ -1.14
YBX3-209ENST00000540747 PLS3P13797 630 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 GABRR2P28476 465 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 MARCKSP29966 332 aaPredicted RBP7.94□□□□□ -1.14
YBX3-209ENST00000540747 CDC25AP30304 524 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 ANP32AP39687 249 aaKnown RBP7.94□□□□□ -1.14
YBX3-209ENST00000540747 PRPHP41219 470 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 TNFSF9P41273 254 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 MCM2P49736 904 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 GUCY2FP51841 1108 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 NCKAP1LP55160 1127 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 LILRA4P59901 499 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 SPAG1Q07617 926 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 ITPRIPL2Q3MIP1 535 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 GPR158Q5T848 1215 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 SPATA1Q5VX52 437 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 OVOS1Q6IE37 1185 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 KBTBD6Q86V97 674 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 GPIHBP1Q8IV16 184 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 YAF2Q8IY57 180 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 TTC8Q8TAM2 541 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 BPIFB1Q8TDL5 484 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 C8orf76Q96K31 380 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 PNMA5Q96PV4 448 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 TSPAN18Q96SJ8 248 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 LLPHQ9BRT6 129 aaKnown RBP7.94□□□□□ -1.14
YBX3-209ENST00000540747 TCHPQ9BT92 498 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 SLC46A2Q9BY10 475 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 ZCWPW1Q9H0M4 648 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 ARRDC1-AS1Q9H2J1 176 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 ANKFY1Q9P2R3 1169 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 SLC27A5Q9Y2P5 690 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 PCDHB6Q9Y5E3 794 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 PCDHGA5Q9Y5G8 931 aa7.94□□□□□ -1.14
YBX3-209ENST00000540747 EML5Q05BV3 1969 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 A0A0B4J269 797 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 LACTBL1A8MY62 500 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 LAD1O00515 517 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 PIRO00625 290 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 CLDN3O15551 220 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 RPP40O75818 363 aaKnown RBP7.93□□□□□ -1.14
YBX3-209ENST00000540747 HMGA1P17096 107 aaKnown RBP7.93□□□□□ -1.14
YBX3-209ENST00000540747 PAX3P23760 479 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 ALDH1A3P47895 512 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 NEK4P51957 841 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 ZNF131P52739 623 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 SLC12A3P55017 1021 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 CYP4F8P98187 520 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 CCDC6Q16204 474 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 PLK5Q496M5 336 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 TMEM119Q4V9L6 283 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 ARSHQ5FYA8 562 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 STPG1Q5TH74 334 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 SLC39A4Q6P5W5 647 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 CEP68Q76N32 757 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 CACNA2D4Q7Z3S7 1137 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 KCTD17Q8N5Z5 321 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 SYT2Q8N9I0 419 aaPredicted RBP7.93□□□□□ -1.14
YBX3-209ENST00000540747 LRRC15Q8TF66 581 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 EZH1Q92800 747 aaPredicted RBP7.93□□□□□ -1.14
YBX3-209ENST00000540747 KIF12Q96FN5 646 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 SENP8Q96LD8 212 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 FIZ1Q96SL8 496 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 LPIN3Q9BQK8 851 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 LSM14BQ9BX40 385 aaKnown RBP7.93□□□□□ -1.14
YBX3-209ENST00000540747 TMEM121BQ9BXQ6 578 aaPredicted RBP7.93□□□□□ -1.14
YBX3-209ENST00000540747 CCSER1Q9C0I3 900 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 ATXN3LQ9H3M9 355 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.93□□□□□ -1.14
YBX3-209ENST00000540747 POLR3BQ9NW08 1133 aaPredicted RBP7.93□□□□□ -1.14
YBX3-209ENST00000540747 KCND2Q9NZV8 630 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 TBX20Q9UMR3 447 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 CCL26Q9Y258 94 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 CACNA1EQ15878 2313 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 NBEAQ8NFP9 2946 aa7.93□□□□□ -1.14
YBX3-209ENST00000540747 SCN1AP35498 2009 aa7.92□□□□□ -1.14
YBX3-209ENST00000540747 SOBPA7XYQ1 873 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms