RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ADAM9Q13443 819 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 TRPC3Q13507 836 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 CENPPQ6IPU0 288 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 RNF19BQ6ZMZ0 732 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 DCP1BQ8IZD4 617 aaKnown RBP14.39□□□□□ -0.11
CCDC130-202ENST00000540216 ELMOD1Q8N336 334 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 FEZF2Q8TBJ5 459 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 PLEKHO2Q8TD55 490 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 C2orf15Q8WU43 125 aaKnown RBP14.39□□□□□ -0.11
CCDC130-202ENST00000540216 MKNK1Q9BUB5 465 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 ZCWPW1Q9H0M4 648 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.39□□□□□ -0.11
CCDC130-202ENST00000540216 L1RE1Q9UN81 338 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 POLIQ9UNA4 740 aa14.39□□□□□ -0.11
CCDC130-202ENST00000540216 ZFP37Q9Y6Q3 630 aaPredicted RBP14.39□□□□□ -0.11
CCDC130-202ENST00000540216 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 SEC24AO95486 1093 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 FAM163BP0C2L3 166 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 OR4Q2P0C623 313 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 KRT13P13646 458 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 SP100P23497 879 aaPredicted RBP14.38□□□□□ -0.11
CCDC130-202ENST00000540216 FSHRP23945 695 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 PCSK1P29120 753 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 VAMP7P51809 220 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 MYL7Q01449 175 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 BIRC3Q13489 604 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 LIMS2Q7Z4I7 341 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 ADGRF2Q8IZF7 708 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 ADSSL1Q8N142 457 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 ZNF516Q92618 1163 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 ERCC4Q92889 916 aaPredicted RBP14.38□□□□□ -0.11
CCDC130-202ENST00000540216 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
CCDC130-202ENST00000540216 DHTKD1Q96HY7 919 aaPredicted RBP14.38□□□□□ -0.11
CCDC130-202ENST00000540216 RTP3Q9BQQ7 232 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 ACBD6Q9BR61 282 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 C1QTNF1Q9BXJ1 281 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 VRTNQ9H8Y1 702 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 AVENQ9NQS1 362 aaPredicted RBP14.38□□□□□ -0.11
CCDC130-202ENST00000540216 MAN1B1Q9UKM7 699 aa14.38□□□□□ -0.11
CCDC130-202ENST00000540216 GABRDO14764 452 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 CETN3O15182 167 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 AKAP3O75969 853 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 EPB41P11171 864 aaKnown RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 MCCD1P59942 119 aaPredicted RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 FKBP3Q00688 224 aaKnown RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 MORC3Q14149 939 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 NFE2Q16621 373 aaPredicted RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 PTPN21Q16825 1174 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 SOWAHAQ2M3V2 549 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 ZACNQ401N2 412 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 PABPC1LQ4VXU2 614 aaKnown RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 SLC39A12Q504Y0 691 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 TDRD10Q5VZ19 366 aaKnown RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 IQCEQ6IPM2 695 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 FOXR2Q6PJQ5 311 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 GET4Q7L5D6 327 aaPredicted RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 GRASPQ7Z6J2 395 aaPredicted RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 TRIML1Q8N9V2 468 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 LEMD2Q8NC56 503 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 KHSRPQ92945 711 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 PGLYRP2Q96PD5 576 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 GBP4Q96PP9 640 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 XYLT2Q9H1B5 865 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 DDX43Q9NXZ2 648 aaKnown RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 EPS15L1Q9UBC2 864 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 DNMT3BQ9UBC3 853 aaKnown RBP14.37□□□□□ -0.11
CCDC130-202ENST00000540216 MUTYHQ9UIF7 546 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 YIPF1Q9Y548 306 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 C5orf42Q9H799 3197 aa14.37□□□□□ -0.11
CCDC130-202ENST00000540216 SLC16A3O15427 465 aaKnown RBP14.36□□□□□ -0.11
CCDC130-202ENST00000540216 TACC1O75410 805 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 VNN2O95498 520 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 CST3P01034 146 aaPredicted RBP14.36□□□□□ -0.11
CCDC130-202ENST00000540216 C4BPAP04003 597 aaKnown RBP14.36□□□□□ -0.11
CCDC130-202ENST00000540216 PTPN2P17706 415 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 WARSP23381 471 aaKnown RBP14.36□□□□□ -0.11
CCDC130-202ENST00000540216 CCNE1P24864 410 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 GBP2P32456 591 aaPredicted RBP14.36□□□□□ -0.11
CCDC130-202ENST00000540216 ALDH1A3P47895 512 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 TUFMP49411 452 aaKnown RBP14.36□□□□□ -0.11
CCDC130-202ENST00000540216 MYL6P60660 151 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 TNNC1P63316 161 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 DLG4P78352 724 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 TWF1Q12792 350 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 NCOA4Q13772 614 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 WDR72Q3MJ13 1102 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
CCDC130-202ENST00000540216 SCARA3Q6AZY7 606 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 ZC3H3Q8IXZ2 948 aaKnown RBP14.36□□□□□ -0.11
CCDC130-202ENST00000540216 ATAD1Q8NBU5 361 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 SPPL2BQ8TCT7 592 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 TAF4BQ92750 862 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 TMEM209Q96SK2 561 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 MMS19Q96T76 1030 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 ABCB6Q9NP58 842 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 ASB3Q9Y575 518 aa14.36□□□□□ -0.11
CCDC130-202ENST00000540216 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
CCDC130-202ENST00000540216 ZNF197O14709 1029 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms