RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TTC9BQ8N6N2 239 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 ATAD1Q8NBU5 361 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 TMC2Q8TDI7 906 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 ZCWPW1Q9H0M4 648 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 DNMT3BQ9UBC3 853 aaKnown RBP19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 USTQ9Y2C2 406 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 FRMD4BQ9Y2L6 1034 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 INSL5Q9Y5Q6 135 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 MTMR11A4FU01 709 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 PI4K2BG5E9Z4 385 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 BIN1O00499 593 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 MAPK13O15264 365 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 HCRTO43612 131 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 HUS1O60921 280 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 VNN1O95497 513 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 C4BPAP04003 597 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 POU2F2P09086 479 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 MYL6P60660 151 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 MYO1EQ12965 1108 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 MORC3Q14149 939 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 CAMK4Q16566 473 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 EDRF1Q3B7T1 1238 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 SLC39A12Q504Y0 691 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 ANKRD40Q6AI12 368 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 TDRD5Q8NAT2 981 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 ELMO3Q96BJ8 720 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 MYADMQ96S97 322 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 XYLT2Q9H1B5 865 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 TRIOO75962 3097 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 NOTCH4Q99466 2003 aa19.66■□□□□ 0.74
SNRPA1-203ENST00000540017 TRIM49BA6NDI0 452 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 XYLBO75191 536 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 RPL13P26373 211 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 DUSP4Q13115 394 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 FAM186BQ8IYM0 893 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 ZDHHC14Q8IZN3 488 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 THEM5Q8N1Q8 247 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 TOP6BLQ8N6T0 577 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 KBTBD7Q8WVZ9 684 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 TMLHEQ9NVH6 421 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 LIMD1Q9UGP4 676 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 MAFFQ9ULX9 164 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 SLC27A5Q9Y2P5 690 aa19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 R3HCC1Q9Y3T6 440 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-203ENST00000540017 PPP1R3GB7ZBB8 358 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 GABRDO14764 452 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 SOAT2O75908 522 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 LRG1P02750 347 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 TRIM49P0CI25 452 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 TRIM49CP0CI26 452 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 ACAT1P24752 427 aaKnown RBP19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 PSMC2P35998 433 aaKnown RBP19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 VAMP7P51809 220 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 TWF1Q12792 350 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 BIRC3Q13489 604 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 CCDC142Q17RM4 750 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 OTOP3Q7RTS5 596 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 ZC3H3Q8IXZ2 948 aaKnown RBP19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 ADGRF2Q8IZF7 708 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 TMEM86AQ8N2M4 240 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 LMBRD1Q9NUN5 540 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 DDX43Q9NXZ2 648 aaKnown RBP19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 CEP72Q9P209 647 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 YIPF1Q9Y548 306 aa19.64■□□□□ 0.73
SNRPA1-203ENST00000540017 NRG2O14511 850 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 DCXO43602 365 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 PHACTR2O75167 634 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 ASGR2P07307 311 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 FSHRP23945 695 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 LMO2P25791 158 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 GBP2P32456 591 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 AP3M2P53677 418 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 MCCD1P59942 119 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 PPP3CAQ08209 521 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 TRPC3Q13507 836 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 ZACNQ401N2 412 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 SV2AQ7L0J3 742 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 GET4Q7L5D6 327 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 ITFG1Q8TB96 612 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 PKMYT1Q99640 499 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 GTPBP4Q9BZE4 634 aaKnown RBP19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 DNAJC25Q9H1X3 360 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 NME7Q9Y5B8 376 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 DOCK8Q8NF50 2099 aa19.63■□□□□ 0.73
SNRPA1-203ENST00000540017 IKBKBO14920 756 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 STAU1O95793 577 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 RHOP08100 348 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 CCNE1P24864 410 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 NCOA4Q13772 614 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 SLC5A9Q2M3M2 681 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 WDR72Q3MJ13 1102 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 PABPC1LQ4VXU2 614 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 POTEHQ6S545 545 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 INTS8Q75QN2 995 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 DPH6Q7L8W6 267 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 HS6ST3Q8IZP7 471 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 PLCD3Q8N3E9 789 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 ACSF2Q96CM8 615 aaPredicted RBP19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 MMS19Q96T76 1030 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 ACBD6Q9BR61 282 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms