RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 XPR1Q9UBH6 696 aa8.07□□□□□ -1.12
TRAV11-201ENST00000539512 KCNE5Q9UJ90 142 aa8.07□□□□□ -1.12
TRAV11-201ENST00000539512 AGAP1Q9UPQ3 857 aa8.07□□□□□ -1.12
TRAV11-201ENST00000539512 TSC22D4Q9Y3Q8 395 aa8.07□□□□□ -1.12
TRAV11-201ENST00000539512 CHST2Q9Y4C5 530 aa8.07□□□□□ -1.12
TRAV11-201ENST00000539512 RAD54BQ9Y620 910 aa8.07□□□□□ -1.12
TRAV11-201ENST00000539512 TRIM43BA6NCK2 446 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 POM121BA6NF01 834 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 RASSF9O75901 435 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 SOAT2O75908 522 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 DNAJB5O75953 348 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 CYP2C9P11712 490 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 KCNA2P16389 499 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 ZNF20P17024 532 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 ITGALP20701 1170 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 PRIM2P49643 509 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 RPS16P62249 146 aaKnown RBP8.06□□□□□ -1.12
TRAV11-201ENST00000539512 OCA2Q04671 838 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 CTBP1Q13363 440 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 LONRF3Q496Y0 759 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 SPDYAQ5MJ70 313 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 SESTD1Q86VW0 696 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 NSUN7Q8NE18 718 aaKnown RBP8.06□□□□□ -1.12
TRAV11-201ENST00000539512 EXTL1Q92935 676 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 TRIM43Q96BQ3 446 aaPredicted RBP8.06□□□□□ -1.12
TRAV11-201ENST00000539512 PLEKHG4BQ96PX9 1271 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 PSMD1Q99460 953 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 DPH1Q9BZG8 443 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 TTYH3Q9C0H2 523 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 MS4A7Q9GZW8 240 aaPredicted RBP8.06□□□□□ -1.12
TRAV11-201ENST00000539512 STK32BQ9NY57 414 aa8.06□□□□□ -1.12
TRAV11-201ENST00000539512 AHRRA9YTQ3 701 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 RASA4BC9J798 803 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 RASA4O43374 803 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 NCR1O76036 304 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 NDUFA10O95299 355 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 LAG3P18627 525 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 CHRM3P20309 590 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 STT3AP46977 705 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 ADAM17P78536 824 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 FPGSQ05932 587 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 DAG1Q14118 895 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 IQCB1Q15051 598 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 METRNLQ641Q3 311 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 LIX1LQ8IVB5 337 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 COLGALT2Q8IYK4 626 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 PSD4Q8NDX1 1056 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 SLC25A43Q8WUT9 341 aaPredicted RBP8.05□□□□□ -1.12
TRAV11-201ENST00000539512 GJA10Q969M2 543 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 STK31Q9BXU1 1019 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 STARD7Q9NQZ5 370 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 HSFX1Q9UBD0 423 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 ITGB1BP2Q9UKP3 347 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 HDAC9Q9UKV0 1011 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 SHOC2Q9UQ13 582 aa8.05□□□□□ -1.12
TRAV11-201ENST00000539512 CFIP05156 583 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 ATXN1LP0C7T5 689 aaKnown RBP8.04□□□□□ -1.12
TRAV11-201ENST00000539512 KLRC1P26715 233 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 VIPR2P41587 438 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 ANXA11P50995 505 aaKnown RBP8.04□□□□□ -1.12
TRAV11-201ENST00000539512 PTTG1IPP53801 180 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 BTKQ06187 659 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 ZNF543Q08ER8 600 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 R3HDM1Q15032 1099 aaKnown RBP8.04□□□□□ -1.12
TRAV11-201ENST00000539512 RNF207Q6ZRF8 634 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 PPP1R32Q7Z5V6 425 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 MORC1Q86VD1 984 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 TMEM132CQ8N3T6 1108 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 IL17DQ8TAD2 202 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 SMCR8Q8TEV9 937 aaPredicted RBP8.04□□□□□ -1.12
TRAV11-201ENST00000539512 IQCDQ96DY2 449 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 MSLNLQ96KJ4 702 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 SLC46A1Q96NT5 459 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 KRTAP4-12Q9BQ66 201 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 HEPHQ9BQS7 1158 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 SPATA5L1Q9BVQ7 753 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 BRIP1Q9BX63 1249 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 TEX101Q9BY14 249 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 ALOXE3Q9BYJ1 711 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 GALNT9Q9HCQ5 603 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 HESX1Q9UBX0 185 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 PADI4Q9UM07 663 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 CEP83Q9Y592 693 aa8.04□□□□□ -1.12
TRAV11-201ENST00000539512 A0A087WWL8 130 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 MBD3L4A6NDZ8 208 aaPredicted RBP8.03□□□□□ -1.12
TRAV11-201ENST00000539512 MBD3L3A6NE82 208 aaPredicted RBP8.03□□□□□ -1.12
TRAV11-201ENST00000539512 GRXCR1A8MXD5 290 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 PYCARD-AS1I3L0S3 204 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 DDX6P26196 483 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRAV11-201ENST00000539512 CASP5P51878 434 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 CXADRP78310 365 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 KRT17Q04695 432 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 EFEMP1Q12805 493 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 RESTQ13127 1097 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 TIGD2Q4W5G0 525 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 YAF2Q8IY57 180 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 SDR16C5Q8N3Y7 309 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 CPEB3Q8NE35 698 aaKnown RBP8.03□□□□□ -1.12
TRAV11-201ENST00000539512 SPSB4Q96A44 273 aa8.03□□□□□ -1.12
TRAV11-201ENST00000539512 TMEM125Q96AQ2 219 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms