RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ARHGAP39Q9C0H5 1083 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 BRF2Q9HAW0 419 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 ERVK-5Q9HDB9 667 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 BCCIPQ9P287 314 aaKnown RBP eCLIP1.27□□□□□ -2.21
HIF1A-204ENST00000539097 ABCF2Q9UG63 623 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 GTF2A1LQ9UNN4 478 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 ACTL7AQ9Y615 435 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 OAS3Q9Y6K5 1087 aaKnown RBP1.27□□□□□ -2.21
HIF1A-204ENST00000539097 MORC2Q9Y6X9 1032 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-204ENST00000539097 TRIM43BA6NCK2 446 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GSPT1P15170 499 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CD19P15391 556 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GCSHP23434 173 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CCND1P24385 295 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 RRADP55042 308 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 NXPH1P58417 271 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 JAG1P78504 1218 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 MGAT5Q09328 741 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 NOMO1Q15155 1222 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PTPRRQ15256 657 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GRAMD1BQ3KR37 738 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 RNF220Q5VTB9 566 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CIAPIN1Q6FI81 312 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CD300LDQ6UXZ3 194 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 LDHAL6AQ6ZMR3 332 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 KRT77Q7Z794 578 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TEX19Q8NA77 164 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 NUDT10Q8NFP7 164 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TMEM163Q8TC26 289 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 LRTOMTQ8WZ04 291 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TRIM43Q96BQ3 446 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GCC1Q96CN9 775 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 NUDT11Q96G61 164 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SPATA5L1Q9BVQ7 753 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SORBS1Q9BX66 1292 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 ACE2Q9BYF1 805 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 WDR12Q9GZL7 423 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 EPS8L2Q9H6S3 715 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CNTD2Q9H8S5 307 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 AGO3Q9H9G7 860 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CNNM1Q9NRU3 951 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 LANCL2Q9NS86 450 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PNPOQ9NVS9 261 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 HCN3Q9P1Z3 774 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 IGSF9Q9P2J2 1179 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 HERC5Q9UII4 1024 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PCDHB6Q9Y5E3 794 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PCDHA1Q9Y5I3 950 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SCINQ9Y6U3 715 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1W2PS29 197 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GAGE12JA6NER3 117 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 LRRC10BA6NIK2 292 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 BTBD19C9JJ37 291 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 IPO5O00410 1097 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 EXOC5O00471 708 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SCAMP1O15126 338 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 ARHGAP6O43182 974 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 DNAJB5O75953 348 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TSPAN15O95858 294 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 LMNAP02545 664 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GAAP10253 952 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TXNP10599 105 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 KRT3P12035 628 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 WT1P19544 449 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CSF2RBP32927 897 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CHKAP35790 457 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PPM1AP35813 382 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SREBF1P36956 1147 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 HALP42357 657 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CDR1P51861 262 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 RPS16P62249 146 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TNFAIP2Q03169 654 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 NOGQ13253 232 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SNAPC2Q13487 334 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FHL3Q13643 280 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 ATP1A4Q13733 1029 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SLC14A2Q15849 920 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TBC1D25Q3MII6 688 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FAM209BQ5JX69 171 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 MFSD14BQ5SR56 506 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PRAMEF14Q5SWL7 426 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PGBD2Q6P3X8 592 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 BORAQ6PGQ7 559 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 MAMDC4Q6UXC1 1216 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 EP400NLQ6ZTU2 488 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 USP51Q70EK9 711 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 DTX2Q86UW9 622 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF280BQ86YH2 543 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PLXDC1Q8IUK5 500 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FAM9AQ8IZU1 332 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 MIER2Q8N344 545 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FAM109AQ8N4B1 249 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PCSK9Q8NBP7 692 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PLA2G15Q8NCC3 412 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GIMAP8Q8ND71 665 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 OR56A3Q8NH54 315 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 KLHDC4Q8TBB5 520 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CFHR4Q92496 578 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SERINC2Q96SA4 455 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TEX101Q9BY14 249 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms