RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 MPHOSPH6Q99547 160 aaKnown RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 ASCC2Q9H1I8 757 aaPredicted RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 CNOT10Q9H9A5 744 aaKnown RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 PTPRHQ9HD43 1115 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 PAK6Q9NQU5 681 aaPredicted RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 AAASQ9NRG9 546 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 ADAM22Q9P0K1 906 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 ANKFY1Q9P2R3 1169 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 ZMYND8Q9ULU4 1186 aaPredicted RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 PCDHGC3Q9UN70 934 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 NOVA2Q9UNW9 492 aaKnown RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 AGTPBP1Q9UPW5 1226 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 NDUFAB1O14561 156 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 TNPO2O14787 897 aaKnown RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 TRAPPC3O43617 180 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 B4GALT4O60513 344 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 CAND2O75155 1236 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 FAM107AO95990 144 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 CST3P01034 146 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 PRKCBP05771 671 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 SYN1P17600 705 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 ITIH2P19823 946 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 PTPN7P35236 360 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 KCNJ1P48048 391 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 SLC26A2P50443 739 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 GSCP56915 257 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 MAGOHP61326 146 aaKnown RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 IRX5P78411 483 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 CAV1Q03135 178 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 KRT17Q04695 432 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 ADCY2Q08462 1091 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 LAMTOR4Q0VGL1 99 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 BYSLQ13895 437 aaKnown RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 MXD4Q14582 209 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 PLCB4Q15147 1175 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 CCNG2Q16589 344 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 KCTD19Q17RG1 926 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 LRRC38Q5VT99 294 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 SCARA3Q6AZY7 606 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 MFSD5Q6N075 450 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 LLGL2Q6P1M3 1020 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 TSHZ1Q6ZSZ6 1077 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 B4GALNT4Q76KP1 1039 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 TRMT10CQ7L0Y3 403 aaKnown RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 NCAPG2Q86XI2 1143 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 IFNLR1Q8IU57 520 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 ZBTB8OSQ8IWT0 167 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 CCDC105Q8IYK2 499 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 C7orf61Q8IZ16 206 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 EXD1Q8NHP7 514 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 FEZF2Q8TBJ5 459 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 ZNF606Q8WXB4 792 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 JPH2Q9BR39 696 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 C11orf70Q9BRQ4 267 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 NFKBIZQ9BYH8 718 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 ROPN1BQ9BZX4 212 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 ZNF518BQ9C0D4 1074 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 NIF3L1Q9GZT8 377 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 CRISPLD2Q9H0B8 497 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 FZD8Q9H461 694 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 ROPN1Q9HAT0 212 aaPredicted RBP9.81□□□□□ -0.84
DDB1-211ENST00000538280 CHST7Q9NS84 486 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 HOMER3Q9NSC5 361 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.81□□□□□ -0.84
DDB1-211ENST00000538280 LTBP2Q14767 1821 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 PLXNA1Q9UIW2 1896 aa9.81□□□□□ -0.84
DDB1-211ENST00000538280 DNAH12Q6ZR08 3092 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 TMEM191CA6NGB0 347 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 DCDC2CA8MYV0 355 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 O00370 1275 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 ACKR2O00590 384 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 TLR3O15455 904 aaKnown RBP9.8□□□□□ -0.84
DDB1-211ENST00000538280 THAP12O43422 761 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 AGTP01019 485 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 CALB1P05937 261 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 TMEM191BP0C7N4 346 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 MAGEA9P43362 315 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 MMP13P45452 471 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 IRX3P78415 501 aaPredicted RBP9.8□□□□□ -0.84
DDB1-211ENST00000538280 POU5F1BQ06416 359 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 SLC20A2Q08357 652 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 IFFO1Q0D2I5 559 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 ZNF252P-AS1Q0IIN9 211 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 IRF5Q13568 498 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 SLC29A2Q14542 456 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 LY6KQ17RY6 165 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 SGSM1Q2NKQ1 1148 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 HSDL1Q3SXM5 330 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 C6orf118Q5T5N4 469 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 UBAP2Q5T6F2 1119 aaKnown RBP9.8□□□□□ -0.84
DDB1-211ENST00000538280 DRICH1Q6PGQ1 229 aaPredicted RBP9.8□□□□□ -0.84
DDB1-211ENST00000538280 C6orf89Q6UWU4 347 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 MPZL3Q6UWV2 235 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 MMS22LQ6ZRQ5 1243 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 YTHDF3Q7Z739 585 aaKnown RBP9.8□□□□□ -0.84
DDB1-211ENST00000538280 RELL1Q8IUW5 271 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 LINC01465Q8N7H1 131 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 NIPA2Q8N8Q9 360 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 SHCBP1Q8NEM2 672 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms