RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SGPL1O95470 568 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 MMP3P08254 477 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 MYL3P08590 195 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF286BP0CG31 522 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 CST5P28325 142 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 TCF7P36402 384 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 PRPHP41219 470 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ECI1P42126 302 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 GRIA2P42262 883 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 TXKP42681 527 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 KCNJ6P48051 423 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 TOB1P50616 345 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 JAK3P52333 1124 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 GJA9P57773 515 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ACTR2P61160 394 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 KRT85P78386 507 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 BEX3Q00994 111 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 SP2Q02086 613 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ARHGAP1Q07960 439 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 IFRD2Q12894 506 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ITGB3BPQ13352 177 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 PPP2R5CQ13362 524 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 STK38Q15208 465 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 LRRC41Q15345 812 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 KCNMB1Q16558 191 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 KLHL40Q2TBA0 621 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 FAM160B1Q5W0V3 765 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ARL6IP4Q66PJ3 421 aaKnown RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 MIS18BP1Q6P0N0 1132 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 SPATC1Q76KD6 591 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 MIER3Q7Z3K6 550 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 JAMLQ86YT9 394 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 SMAP1Q8IYB5 467 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 LILRA2Q8N149 483 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 RDM1Q8NG50 284 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 RASSF8Q8NHQ8 419 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ETNPPLQ8TBG4 499 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 KCNG4Q8TDN1 519 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 GLG1Q92896 1179 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 COPS5Q92905 334 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ATP6V0A1Q93050 837 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 FERMT2Q96AC1 680 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF669Q96BR6 464 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 GLT1D1Q96MS3 346 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 MBOAT7Q96N66 472 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 KATNAL1Q9BW62 490 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 UPF3AQ9H1J1 476 aaKnown RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 NKX2-4Q9H2Z4 354 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ZSWIM4Q9H7M6 989 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 SP110Q9HB58 689 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 KCNMB3Q9NPA1 279 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 OGDHLQ9ULD0 1010 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 MYH15Q9Y2K3 1946 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 DOCK5Q9H7D0 1870 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 NPHP3-ACAD11A0A0J9YXS1 232 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 VWA3AA6NCI4 1184 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 MYADML2A6NDP7 307 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 GOLGA6L4A6NEF3 574 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 NOTOA8MTQ0 251 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 NRDCO43847 1150 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 DKC1O60832 514 aaKnown RBP eCLIP4.79□□□□□ -1.641e-36■■□□□ 12.2
SNHG1-208ENST00000538266 CABYRO75952 493 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 PAPLNO95428 1278 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 CCNE2O96020 404 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 LGALS2P05162 132 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ASGR1P07306 291 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SNRPB2P08579 225 aaKnown RBP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SUPT20HL2P0C7V6 817 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 PLS3P13797 630 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 PAMP19021 973 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 PTGS1P23219 599 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 TECP42680 631 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ME1P48163 572 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SLC26A2P50443 739 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ACLYP53396 1101 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SOX10P56693 466 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 NKX3-2P78367 333 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ATP2C1P98194 919 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 PURAQ00577 322 aaKnown RBP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SNX17Q15036 470 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SF1Q15637 639 aaKnown RBP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 KCNA10Q16322 511 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 HSDL1Q3SXM5 330 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 TMEM63BQ5T3F8 832 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 UTP14CQ5TAP6 766 aaKnown RBP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 HAUS3Q68CZ6 603 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 NCAPH2Q6IBW4 605 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 FAM173BQ6P4H8 233 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 GALNT18Q6P9A2 607 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 CXCL17Q6UXB2 119 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 CYP2R1Q6VVX0 501 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 DPH6Q7L8W6 267 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 NECAB2Q7Z6G3 386 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ZSCAN30Q86W11 494 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ZSWIM9Q86XI8 627 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 CPNE8Q86YQ8 564 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 KSR1Q8IVT5 923 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SEPT1Q8WYJ6 367 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 FAM168AQ92567 244 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 HAS1Q92839 578 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms