RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 NRG2O14511 850 aaPredicted RBP15.93■□□□□ 0.14
USP28-204ENST00000537642 DPYDQ12882 1025 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 PSMD6Q15008 389 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 DUOXA2Q1HG44 320 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 PRSS36Q5K4E3 855 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 PARM1Q6UWI2 310 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 WDR49Q8IV35 697 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 HS6ST3Q8IZP7 471 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 THEM5Q8N1Q8 247 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 TTC9BQ8N6N2 239 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 FGF14Q92915 247 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 TCEAL4Q96EI5 215 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 RPP25Q9BUL9 199 aaKnown RBP15.93■□□□□ 0.14
USP28-204ENST00000537642 GZF1Q9H116 711 aaPredicted RBP15.93■□□□□ 0.14
USP28-204ENST00000537642 KCTD10Q9H3F6 313 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 L1RE1Q9UN81 338 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 SLC27A5Q9Y2P5 690 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 NUMBLQ9Y6R0 609 aa15.93■□□□□ 0.14
USP28-204ENST00000537642 TNNC2P02585 160 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 DLATP10515 647 aaKnown RBP15.92■□□□□ 0.14
USP28-204ENST00000537642 CEBPBP17676 345 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 CCR2P41597 374 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 SLC39A12Q504Y0 691 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 LRRTM3Q86VH5 581 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 SUGP1Q8IWZ8 645 aaKnown RBP15.92■□□□□ 0.14
USP28-204ENST00000537642 ELMOD1Q8N336 334 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 PDCL2Q8N4E4 241 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 GOLGA5Q8TBA6 731 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 ZNF512Q96ME7 567 aaPredicted RBP15.92■□□□□ 0.14
USP28-204ENST00000537642 CGRRF1Q99675 332 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 DNAJC25Q9H1X3 360 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 DMAC2Q9NW81 257 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 GDAP2Q9NXN4 497 aa15.92■□□□□ 0.14
USP28-204ENST00000537642 EXOC3O60645 756 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 HUS1O60921 280 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 MOSPD3O75425 235 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 SOAT2O75908 522 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 RHOBTB3O94955 611 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 CDR1P51861 262 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 EPHA5P54756 1037 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 VCPP55072 806 aaKnown RBP15.91■□□□□ 0.14
USP28-204ENST00000537642 PLD1Q13393 1074 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 IQCEQ6IPM2 695 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 PDZD4Q76G19 769 aaPredicted RBP15.91■□□□□ 0.14
USP28-204ENST00000537642 TRAPPC11Q7Z392 1133 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 PLEKHO2Q8TD55 490 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 CCDC127Q96BQ5 260 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 MCRS1Q96EZ8 462 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 FNBP1Q96RU3 617 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 HSFX1Q9UBD0 423 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 ARIH1Q9Y4X5 557 aaPredicted RBP15.91■□□□□ 0.14
USP28-204ENST00000537642 SNX9Q9Y5X1 595 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 MUC6Q6W4X9 2439 aa15.91■□□□□ 0.14
USP28-204ENST00000537642 PDXKO00764 312 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 ZNF197O14709 1029 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 PRPF40AO75400 957 aaKnown RBP15.9■□□□□ 0.14
USP28-204ENST00000537642 MICAL2O94851 1124 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 SRFP11831 508 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 TNNI1P19237 187 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 EPHB3P54753 998 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 CYP4A22Q5TCH4 519 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 MTSS1LQ765P7 747 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 OSTM1Q86WC4 334 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 SLC9A9Q8IVB4 645 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 FMR1NBQ8N0W7 255 aaPredicted RBP15.9■□□□□ 0.14
USP28-204ENST00000537642 TMEM86AQ8N2M4 240 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 TOP6BLQ8N6T0 577 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 TMEM174Q8WUU8 243 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 ZNF516Q92618 1163 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 CCDC47Q96A33 483 aaKnown RBP15.9■□□□□ 0.14
USP28-204ENST00000537642 HPDLQ96IR7 371 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 LRRC3Q9BY71 257 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 ASAH2Q9NR71 780 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 TMLHEQ9NVH6 421 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 GDE1Q9NZC3 331 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 WDFY4Q6ZS81 3184 aa15.9■□□□□ 0.14
USP28-204ENST00000537642 GABRDO14764 452 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 HCRTO43612 131 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 CST3P01034 146 aaPredicted RBP15.89■□□□□ 0.13
USP28-204ENST00000537642 NR3C1P04150 777 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 CFHP08603 1231 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 MYL4P12829 197 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 ACAT1P24752 427 aaKnown RBP15.89■□□□□ 0.13
USP28-204ENST00000537642 ALDH1A3P47895 512 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 CASP4P49662 377 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 SMARCB1Q12824 385 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 MYO1EQ12965 1108 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 KCNB1Q14721 858 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 SOWAHAQ2M3V2 549 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 IER5LQ5T953 404 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 LIMS2Q7Z4I7 341 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 TMC8Q8IU68 726 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 DCP1BQ8IZD4 617 aaKnown RBP15.89■□□□□ 0.13
USP28-204ENST00000537642 ADGRF2Q8IZF7 708 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 LEMD2Q8NC56 503 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 SPATA18Q8TC71 538 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 C2orf15Q8WU43 125 aaKnown RBP15.89■□□□□ 0.13
USP28-204ENST00000537642 KXD1Q9BQD3 176 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 ACBD6Q9BR61 282 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 DDX43Q9NXZ2 648 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms