RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 JAMLQ86YT9 394 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 FEZF2Q8TBJ5 459 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 C1orf54Q8WWF1 131 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 DNAJB3Q8WWF6 145 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 HPDLQ96IR7 371 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 ASB7Q9H672 318 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 PARVAQ9NVD7 372 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 SNTG2Q9NY99 539 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 SNX24Q9Y343 169 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 RRN3P2A6NIE6 340 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 TCF4P15884 667 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 RAD23BP54727 409 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 SIX1Q15475 284 aaPredicted RBP18.52■□□□□ 0.56
SNX17-210ENST00000537606 CEP85LQ5SZL2 805 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 SAPCD2Q86UD0 394 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 ZNF410Q86VK4 478 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 TMEM35BQ8NCS4 154 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 SEC14L1Q92503 715 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 KIF12Q96FN5 646 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 MCEEQ96PE7 176 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 HEMGNQ9BXL5 484 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 KLHL11Q9NVR0 708 aa18.52■□□□□ 0.56
SNX17-210ENST00000537606 MANSC4A6NHS7 340 aaPredicted RBP18.52■□□□□ 0.55
SNX17-210ENST00000537606 TREHO43280 583 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 ATP1A2P50993 1020 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 SNX1Q13596 522 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 MFSD10Q14728 455 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 ATP13A4Q4VNC1 1196 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 C17orf99Q6UX52 265 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 ERICH1Q86X53 443 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 CCDC50Q8IVM0 306 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 UBLCP1Q8WVY7 318 aaPredicted RBP18.52■□□□□ 0.55
SNX17-210ENST00000537606 DDX27Q96GQ7 796 aaKnown RBP18.52■□□□□ 0.55
SNX17-210ENST00000537606 ERP44Q9BS26 406 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 BCO2Q9BYV7 579 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 CENPHQ9H3R5 247 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 DPP3Q9NY33 737 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 CYTH4Q9UIA0 394 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 NRCAMQ92823 1304 aa18.52■□□□□ 0.55
SNX17-210ENST00000537606 SLC1A1P43005 524 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 PTGIRP43119 386 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 RGMBQ6NW40 437 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 IFNL1Q8IU54 200 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 CCDC105Q8IYK2 499 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 APOL6Q9BWW8 343 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 GCOM2Q9BZD3 368 aaPredicted RBP18.51■□□□□ 0.55
SNX17-210ENST00000537606 ELOVL4Q9GZR5 314 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 LRRC4CQ9HCJ2 640 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 MTUS1Q9ULD2 1270 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 SCINQ9Y6U3 715 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 ZSWIM8A7E2V4 1837 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 CHRNA3P32297 505 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 CLUL1Q15846 466 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 GLRA4Q5JXX5 417 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 DUPD1Q68J44 220 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 CHADLQ6NUI6 762 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 SLC4A11Q8NBS3 891 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.51■□□□□ 0.55
SNX17-210ENST00000537606 TMEM40Q8WWA1 233 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 ATG4AQ8WYN0 398 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 PKNOX2Q96KN3 472 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 ZMAT2Q96NC0 199 aaKnown RBP18.51■□□□□ 0.55
SNX17-210ENST00000537606 FAM118BQ9BPY3 351 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 TRIP11Q15643 1979 aa18.51■□□□□ 0.55
SNX17-210ENST00000537606 GOLGA8SH3BPF8 625 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 OGDHQ02218 1023 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 DHX9Q08211 1270 aaKnown RBP18.5■□□□□ 0.55
SNX17-210ENST00000537606 TRIP12Q14669 1992 aaPredicted RBP18.5■□□□□ 0.55
SNX17-210ENST00000537606 DNAJC24Q6P3W2 148 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 DCUN1D2Q6PH85 259 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 TMC3Q7Z5M5 1100 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 EIF1ADQ8N9N8 165 aaKnown RBP18.5■□□□□ 0.55
SNX17-210ENST00000537606 RAB17Q9H0T7 212 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 TMEM191CA6NGB0 347 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 F8VP50 259 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 H0YGN5 161 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 TNPO2O14787 897 aaKnown RBP18.5■□□□□ 0.55
SNX17-210ENST00000537606 PPEF2O14830 753 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 LSM8O95777 96 aaKnown RBP18.5■□□□□ 0.55
SNX17-210ENST00000537606 HSPA6P17066 643 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 CTGFP29279 349 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 COILP38432 576 aaPredicted RBP18.5■□□□□ 0.55
SNX17-210ENST00000537606 YWHAEP62258 255 aaKnown RBP18.5■□□□□ 0.55
SNX17-210ENST00000537606 ZNF252P-AS1Q0IIN9 211 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 DHX34Q14147 1143 aaKnown RBP18.5■□□□□ 0.55
SNX17-210ENST00000537606 PPP2R5EQ16537 467 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 PTPN20Q4JDL3 420 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 ANKS1BQ7Z6G8 1248 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 USP6NLQ92738 828 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 ZIC5Q96T25 663 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 FAM114A2Q9NRY5 505 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 CHST7Q9NS84 486 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 GJD2Q9UKL4 321 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 PCDHGC3Q9UN70 934 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNX17-210ENST00000537606 CEP83Q9Y592 693 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 NFS1Q9Y697 457 aa18.5■□□□□ 0.55
SNX17-210ENST00000537606 CALB1P05937 261 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 EIF4BP23588 611 aaKnown RBP18.49■□□□□ 0.55
SNX17-210ENST00000537606 AKAP5P24588 427 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms