RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 F5H697 171 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 SOCS2O14508 198 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 GRM6O15303 877 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 SBK3P0C264 359 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 MTHFD1P11586 935 aaKnown RBP3.35□□□□□ -1.87
SKA3-207ENST00000536239 PCSK6P29122 969 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 ARHGAP25P42331 645 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 ID4P47928 161 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 TUBB3Q13509 450 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 LRRC41Q15345 812 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 PABPC1LQ4VXU2 614 aaKnown RBP3.35□□□□□ -1.87
SKA3-207ENST00000536239 SLC29A4Q7RTT9 530 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 IRF2BP2Q7Z5L9 587 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 CNGA4Q8IV77 575 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 IL17RDQ8NFM7 739 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 USP7Q93009 1102 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 FKBP10Q96AY3 582 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 RNPC3Q96LT9 517 aaKnown RBP3.35□□□□□ -1.87
SKA3-207ENST00000536239 TPSD1Q9BZJ3 242 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 IMPG2Q9BZV3 1241 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 AMBRA1Q9C0C7 1298 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 VPS33BQ9H267 617 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 ARHGEF3Q9NR81 526 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 JKAMPQ9P055 326 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 ZNF112Q9UJU3 913 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 SPATA31A3Q5VYP0 1347 aa3.35□□□□□ -1.87
SKA3-207ENST00000536239 TRIAP1O43715 76 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 ZEB2O60315 1214 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 SRSF2Q01130 221 aaKnown RBP3.34□□□□□ -1.87
SKA3-207ENST00000536239 TBCCQ15814 346 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 TAPT1Q6NXT6 567 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 NANOGP1Q8N7R0 232 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 NRACQ8N912 160 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 SLC17A8Q8NDX2 589 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 TMIEQ8NEW7 156 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 PRSS3P2Q8NHM4 247 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 POC1BQ8TC44 478 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 CCDC136Q96JN2 1154 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 TRIB1Q96RU8 372 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 OSBPL9Q96SU4 736 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 ACTRT3Q9BYD9 372 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 IFT22Q9H7X7 185 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.34□□□□□ -1.87
SKA3-207ENST00000536239 FANCIQ9NVI1 1328 aa3.34□□□□□ -1.87
SKA3-207ENST00000536239 SLC43A1O75387 559 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 SLC5A3P53794 718 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 SCAND1P57086 179 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 DHCR24Q15392 516 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 SF3A1Q15459 793 aaKnown RBP3.33□□□□□ -1.88
SKA3-207ENST00000536239 Q4G0T1 1027 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 FLYWCH1Q4VC44 716 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 DALRD3Q5D0E6 543 aaKnown RBP3.33□□□□□ -1.88
SKA3-207ENST00000536239 AARS2Q5JTZ9 985 aaKnown RBP3.33□□□□□ -1.88
SKA3-207ENST00000536239 ANKRD16Q6P6B7 361 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 MRPL10Q7Z7H8 261 aaKnown RBP3.33□□□□□ -1.88
SKA3-207ENST00000536239 C8orf58Q8NAV2 365 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 APPBP2Q92624 585 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 MFSD3Q96ES6 412 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 C5orf34Q96MH7 638 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 SMOQ99835 787 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 C7orf25Q9BPX7 421 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 ZSWIM4Q9H7M6 989 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 TRNAU1APQ9NX07 287 aaKnown RBP3.33□□□□□ -1.88
SKA3-207ENST00000536239 SLC45A2Q9UMX9 530 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 DNM3Q9UQ16 869 aa3.33□□□□□ -1.88
SKA3-207ENST00000536239 E5RJQ4 531 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 BCAR3O75815 825 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 NXPH3O95157 252 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 NDUFV1P49821 464 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 TWIST1Q15672 202 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 ZNF365Q70YC5 407 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 ZNF804AQ7Z570 1209 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 CHSY1Q86X52 802 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 RHOT1Q8IXI2 618 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 PNLDC1Q8NA58 520 aaKnown RBP3.32□□□□□ -1.88
SKA3-207ENST00000536239 PIGOQ8TEQ8 1089 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 DPF2Q92785 391 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 VCPIP1Q96JH7 1222 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 TTC1Q99614 292 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 PACSIN1Q9BY11 444 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 PDGFCQ9NRA1 345 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 FANCLQ9NW38 375 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 PLAAQ9Y263 795 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 TTC3P53804 2025 aa3.32□□□□□ -1.88
SKA3-207ENST00000536239 TCF20Q9UGU0 1960 aaKnown RBP3.31□□□□□ -1.88
SKA3-207ENST00000536239 WDR17Q8IZU2 1322 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 A0A087X0B3 334 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 FAM90A10PA6NDY2 464 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 H0YIZ8 118 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 FGBP02675 491 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 ALDH9A1P49189 494 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 MTNR1BP49286 362 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 THBS3P49746 956 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 KRTAP27-1Q3LI81 207 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 MIS18BP1Q6P0N0 1132 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 SLC30A10Q6XR72 485 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 KRT78Q8N1N4 520 aa3.31□□□□□ -1.88
SKA3-207ENST00000536239 ZBTB8BQ8NAP8 495 aaPredicted RBP3.31□□□□□ -1.88
SKA3-207ENST00000536239 ACRBPQ8NEB7 543 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms