RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 WDR6Q9NNW5 1121 aaKnown RBP23.86■■□□□ 1.41
VPS37C-202ENST00000535818 MAFFQ9ULX9 164 aa23.86■■□□□ 1.41
VPS37C-202ENST00000535818 A0A0C4DFX4 3053 aa23.86■■□□□ 1.41
VPS37C-202ENST00000535818 PAPLNO95428 1278 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 SEC24AO95486 1093 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 CST3P01034 146 aaPredicted RBP23.85■■□□□ 1.41
VPS37C-202ENST00000535818 CCNE1P24864 410 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 CLDN10P78369 228 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 MYL7Q01449 175 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 LRRC63Q05C16 580 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 TDRD10Q5VZ19 366 aaKnown RBP23.85■■□□□ 1.41
VPS37C-202ENST00000535818 ANKRD40Q6AI12 368 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 SYAP1Q96A49 352 aaPredicted RBP23.85■■□□□ 1.41
VPS37C-202ENST00000535818 ACSF2Q96CM8 615 aaPredicted RBP23.85■■□□□ 1.41
VPS37C-202ENST00000535818 EEF2KMTQ96G04 330 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 DHTKD1Q96HY7 919 aaPredicted RBP23.85■■□□□ 1.41
VPS37C-202ENST00000535818 MMS19Q96T76 1030 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 MKNK1Q9BUB5 465 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 DDX43Q9NXZ2 648 aaKnown RBP23.85■■□□□ 1.41
VPS37C-202ENST00000535818 KIAA1468Q9P260 1216 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 INSL5Q9Y5Q6 135 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 DENND4AQ7Z401 1863 aa23.85■■□□□ 1.41
VPS37C-202ENST00000535818 VCANP13611 3396 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 TRIM49BA6NDI0 452 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 ATICP31939 592 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 TNNC1P63316 161 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 FKBP3Q00688 224 aaKnown RBP23.84■■□□□ 1.41
VPS37C-202ENST00000535818 TSPY1Q01534 308 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 SLC39A12Q504Y0 691 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 DPH6Q7L8W6 267 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 GRASPQ7Z6J2 395 aaPredicted RBP23.84■■□□□ 1.41
VPS37C-202ENST00000535818 TRIML1Q8N9V2 468 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 RTP3Q9BQQ7 232 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 ZCWPW1Q9H0M4 648 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 CLSTN2Q9H4D0 955 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 LMBRD1Q9NUN5 540 aa23.84■■□□□ 1.41
VPS37C-202ENST00000535818 MTMR11A4FU01 709 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 C2CD4DB7Z1M9 353 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 IKBKBO14920 756 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 C4BPAP04003 597 aaKnown RBP23.83■■□□□ 1.41
VPS37C-202ENST00000535818 POU2F2P09086 479 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 TRIM49P0CI25 452 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 TRIM49CP0CI26 452 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 CD44P16070 742 aaKnown RBP23.83■■□□□ 1.41
VPS37C-202ENST00000535818 PMS1P54277 932 aaKnown RBP23.83■■□□□ 1.41
VPS37C-202ENST00000535818 MYL6P60660 151 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 NCOA4Q13772 614 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 WDR72Q3MJ13 1102 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 OTOP3Q7RTS5 596 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 DCP1BQ8IZD4 617 aaKnown RBP23.83■■□□□ 1.41
VPS37C-202ENST00000535818 ELMOD1Q8N336 334 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 SPATA18Q8TC71 538 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 MMRN2Q9H8L6 949 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 CTNND2Q9UQB3 1225 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 USTQ9Y2C2 406 aa23.83■■□□□ 1.41
VPS37C-202ENST00000535818 BMP6P22004 513 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 GBP2P32456 591 aaPredicted RBP23.82■■□□□ 1.4
VPS37C-202ENST00000535818 LHX1P48742 406 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 SOWAHAQ2M3V2 549 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 ZNF699Q32M78 642 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 ZACNQ401N2 412 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 GET4Q7L5D6 327 aaPredicted RBP23.82■■□□□ 1.4
VPS37C-202ENST00000535818 RNF135Q8IUD6 432 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 NELFBQ8WX92 580 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 NUP62CLQ9H1M0 184 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 NXF1Q9UBU9 619 aaKnown RBP23.82■■□□□ 1.4
VPS37C-202ENST00000535818 YIPF1Q9Y548 306 aa23.82■■□□□ 1.4
VPS37C-202ENST00000535818 TTC28Q96AY4 2481 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 BICDL2A1A5D9 508 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 SLC16A3O15427 465 aaKnown RBP23.81■■□□□ 1.4
VPS37C-202ENST00000535818 STAU1O95793 577 aaKnown RBP23.81■■□□□ 1.4
VPS37C-202ENST00000535818 ACAT1P24752 427 aaKnown RBP23.81■■□□□ 1.4
VPS37C-202ENST00000535818 PCSK1P29120 753 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 PIK3CAP42336 1068 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 ENPEPQ07075 957 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 TWF1Q12792 350 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 DUSP4Q13115 394 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 PLD1Q13393 1074 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 SV2AQ7L0J3 742 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 PLCD3Q8N3E9 789 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 ATAD1Q8NBU5 361 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 ACBD6Q9BR61 282 aa23.81■■□□□ 1.4
VPS37C-202ENST00000535818 PPP1R3GB7ZBB8 358 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 VNN1O95497 513 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 VNN2O95498 520 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 FSHRP23945 695 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 GCLMP48507 274 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 CDR1P51861 262 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 NTHL1P78549 312 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 SMARCB1Q12824 385 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 PAK1Q13153 545 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 PABPC1LQ4VXU2 614 aaKnown RBP23.8■■□□□ 1.4
VPS37C-202ENST00000535818 ZNF667Q5HYK9 610 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 C1orf220Q5T0J3 134 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 OSTM1Q86WC4 334 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 ZC3H3Q8IXZ2 948 aaKnown RBP23.8■■□□□ 1.4
VPS37C-202ENST00000535818 C2orf15Q8WU43 125 aaKnown RBP23.8■■□□□ 1.4
VPS37C-202ENST00000535818 XYLT2Q9H1B5 865 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 HCFC1R1Q9NWW0 138 aa23.8■■□□□ 1.4
VPS37C-202ENST00000535818 SLC27A5Q9Y2P5 690 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms