RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 RPN1P04843 607 aaKnown RBP17.66■□□□□ 0.42
ATL3-202ENST00000535789 TDGQ13569 410 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 MYBPC2Q14324 1141 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 SV2CQ496J9 727 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 CENPPQ6IPU0 288 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 PARM1Q6UWI2 310 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 USP37Q86T82 979 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 UBALD2Q8IYN6 164 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 PDCL2Q8N4E4 241 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 LRRC52Q8N7C0 313 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 RDH13Q8NBN7 331 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 ATAD1Q8NBU5 361 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 LRRC3Q9BY71 257 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 AVENQ9NQS1 362 aaPredicted RBP17.66■□□□□ 0.42
ATL3-202ENST00000535789 TMLHEQ9NVH6 421 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATL3-202ENST00000535789 ITGA11Q9UKX5 1188 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 CDH7Q9ULB5 785 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 NCANO14594 1321 aa17.66■□□□□ 0.42
ATL3-202ENST00000535789 ZNF202O95125 648 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 PAX3P23760 479 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 ELF1P32519 619 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 CASP4P49662 377 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 BFSP1Q12934 665 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 DUSP4Q13115 394 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 SNW1Q13573 536 aaKnown RBP17.65■□□□□ 0.42
ATL3-202ENST00000535789 PSMD6Q15008 389 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 TMC8Q8IU68 726 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 WDR49Q8IV35 697 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 FMR1NBQ8N0W7 255 aaPredicted RBP17.65■□□□□ 0.42
ATL3-202ENST00000535789 CSGALNACT2Q8N6G5 542 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 XXYLT1Q8NBI6 393 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 ZNF516Q92618 1163 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 PBXIP1Q96AQ6 731 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 PKMYT1Q99640 499 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 CGRRF1Q99675 332 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 CORO1BQ9BR76 489 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 DMAC2Q9NW81 257 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 IGSF9Q9P2J2 1179 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 SLC27A5Q9Y2P5 690 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 NME7Q9Y5B8 376 aa17.65■□□□□ 0.42
ATL3-202ENST00000535789 TULP1O00294 542 aaPredicted RBP17.64■□□□□ 0.41
ATL3-202ENST00000535789 RHOBTB3O94955 611 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 MYL1P05976 194 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 TMEM191BP0C7N4 346 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 ATF6P18850 670 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 EPHA5P54756 1037 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 SNRPFP62306 86 aaKnown RBP17.64■□□□□ 0.41
ATL3-202ENST00000535789 SLC39A12Q504Y0 691 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 IER5LQ5T953 404 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 CWF19L1Q69YN2 538 aaKnown RBP17.64■□□□□ 0.41
ATL3-202ENST00000535789 LIMS2Q7Z4I7 341 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 SLC44A3Q8N4M1 653 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 FBXL6Q8N531 539 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 ENGASEQ8NFI3 743 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 MFSD14AQ96MC6 490 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 OXCT2Q9BYC2 517 aaPredicted RBP17.64■□□□□ 0.41
ATL3-202ENST00000535789 GDAP2Q9NXN4 497 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 MYO16Q9Y6X6 1858 aa17.64■□□□□ 0.41
ATL3-202ENST00000535789 USP34Q70CQ2 3546 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 KRT19P08727 400 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 DLATP10515 647 aaKnown RBP17.63■□□□□ 0.41
ATL3-202ENST00000535789 GJA1P17302 382 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 PTPN2P17706 415 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 FCARP24071 287 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 PNPLA4P41247 253 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 PSMD2Q13200 908 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 SOWAHAQ2M3V2 549 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 HS2ST1Q7LGA3 356 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 CACTINQ8WUQ7 758 aaKnown RBP17.63■□□□□ 0.41
ATL3-202ENST00000535789 KBTBD7Q8WVZ9 684 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 ANKRD36BP1Q96IX9 119 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 KIAA1586Q9HCI6 787 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 ZNF334Q9HCZ1 680 aaPredicted RBP17.63■□□□□ 0.41
ATL3-202ENST00000535789 DSEQ9UL01 958 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 MAFFQ9ULX9 164 aa17.63■□□□□ 0.41
ATL3-202ENST00000535789 MRPS23Q9Y3D9 190 aaKnown RBP17.63■□□□□ 0.41
ATL3-202ENST00000535789 CST3P01034 146 aaPredicted RBP17.62■□□□□ 0.41
ATL3-202ENST00000535789 NPR3P17342 541 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 ACAT1P24752 427 aaKnown RBP17.62■□□□□ 0.41
ATL3-202ENST00000535789 RBP5P82980 135 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 PNOCQ13519 176 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 NFKBIBQ15653 356 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 TRAPPC11Q7Z392 1133 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 STKLD1Q8NE28 680 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 SHKBP1Q8TBC3 707 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 TMEM174Q8WUU8 243 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 CCDC127Q96BQ5 260 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 MCRS1Q96EZ8 462 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 KXD1Q9BQD3 176 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 LPIN3Q9BQK8 851 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 PLA2G2FQ9BZM2 168 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 CGNQ9P2M7 1197 aaKnown RBP17.62■□□□□ 0.41
ATL3-202ENST00000535789 HCN4Q9Y3Q4 1203 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 SNX9Q9Y5X1 595 aa17.62■□□□□ 0.41
ATL3-202ENST00000535789 ZFP37Q9Y6Q3 630 aaPredicted RBP17.62■□□□□ 0.41
ATL3-202ENST00000535789 KRBA1A5PL33 1030 aa17.61■□□□□ 0.41
ATL3-202ENST00000535789 LRRIQ3A6PVS8 624 aaPredicted RBP17.61■□□□□ 0.41
ATL3-202ENST00000535789 GABRDO14764 452 aa17.61■□□□□ 0.41
ATL3-202ENST00000535789 EXOC3O60645 756 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms