RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 ZNF252P-AS1Q0IIN9 211 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 SLC13A5Q86YT5 568 aaPredicted RBP19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 TRPV1Q8NER1 839 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 ARL8AQ96BM9 186 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 DPP3Q9NY33 737 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 SLC5A4Q9NY91 659 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 ADAM21Q9UKJ8 722 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 GABRQQ9UN88 632 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 R3HDM2Q9Y2K5 976 aaKnown RBP19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 CCDC188H7C350 402 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 AP3M2P53677 418 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 ADCY2Q08462 1091 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 FAM187BQ17R55 369 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 PTPN20Q4JDL3 420 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 FAM81BQ96LP2 452 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 CHST7Q9NS84 486 aa19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 PIN4Q9Y237 131 aaKnown RBP19.4■□□□□ 0.7
HTATSF1-204ENST00000535601 MMP8P22894 467 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 IGFBP6P24592 240 aaPredicted RBP19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 SURF1Q15526 300 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 LIN9Q5TKA1 542 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 KAZNQ674X7 775 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 SLC4A11Q8NBS3 891 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 ADPGKQ9BRR6 497 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 FAM204AQ9H8W3 233 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 IL18RAPO95256 599 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 HOXD8P13378 290 aaPredicted RBP19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 VPS41P49754 854 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 PSEN2P49810 448 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 CCDC137Q6PK04 289 aaKnown RBP19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 JAMLQ86YT9 394 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 SH2D3CQ8N5H7 860 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 COL1A2P08123 1366 aa19.39■□□□□ 0.69
HTATSF1-204ENST00000535601 GOLGA6L10A0A0M3HER8 536 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 KRT10P13645 584 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 GPS2Q13227 327 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 TCEAL1Q15170 157 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 SIX1Q15475 284 aaPredicted RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 EMBQ6PCB8 327 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 PHF13Q86YI8 300 aaPredicted RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 HOMEZQ8IX15 550 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 CPXM1Q96SM3 734 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 CCDC66A2RUB6 948 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 CTSHP09668 335 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 SMTNL2Q2TAL5 461 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 TTC19Q6DKK2 380 aaPredicted RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 DCUN1D2Q6PH85 259 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 CXCL17Q6UXB2 119 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 CCDC105Q8IYK2 499 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 CCDC26Q8TAB7 109 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 JOSD2Q8TAC2 188 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 PIK3R5Q8WYR1 880 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 HEXIM2Q96MH2 286 aaKnown RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 TRIM6Q9C030 488 aaPredicted RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 CENPHQ9H3R5 247 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 TTC7AQ9ULT0 858 aaPredicted RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 MANSC4A6NHS7 340 aaPredicted RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 PROSCO94903 275 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 RALAP11233 206 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 PLTPP55058 493 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 RAB6CQ53S08 254 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 PLEKHA7Q6IQ23 1121 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 ERICH1Q86X53 443 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 HAUS1Q96CS2 278 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 DDX27Q96GQ7 796 aaKnown RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 RAB6CQ9H0N0 254 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 AVENQ9NQS1 362 aaPredicted RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 FAM49BQ9NUQ9 324 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 UTP11Q9Y3A2 253 aaKnown RBP19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 SNX9Q9Y5X1 595 aa19.38■□□□□ 0.69
HTATSF1-204ENST00000535601 GRAP2O75791 330 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 NDST1P52848 882 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 DNAJC24Q6P3W2 148 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 IFNLR1Q8IU57 520 aaPredicted RBP19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 GCOM2Q9BZD3 368 aaPredicted RBP19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 OSBPL7Q9BZF2 842 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 MEIS3P2A8K0S8 358 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 TULP2O00295 520 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 LMAN1P49257 510 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 FSCN1Q16658 493 aaKnown RBP19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 CCDC142Q17RM4 750 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 MAATS1Q7Z4T9 603 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 UHMK1Q8TAS1 419 aaKnown RBP19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 FEZF2Q8TBJ5 459 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 PIWIL1Q96J94 861 aaKnown RBP19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 SLITRK6Q9H5Y7 841 aa19.37■□□□□ 0.69
HTATSF1-204ENST00000535601 M0QYV0 167 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 PHF2O75151 1096 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 RECQL4O94761 1208 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 CYP3A5P20815 502 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 RGS7P49802 495 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 KCNT1Q5JUK3 1230 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 CYP4F22Q6NT55 531 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 TMEM35BQ8NCS4 154 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 USP6NLQ92738 828 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 CAVIN3Q969G5 261 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 MRPL45Q9BRJ2 306 aaKnown RBP19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 AP5M1Q9H0R1 490 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 RABEP2Q9H5N1 569 aa19.36■□□□□ 0.69
HTATSF1-204ENST00000535601 DNAJC17Q9NVM6 304 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms