RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 SLC26A4O43511 780 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 PGK2P07205 417 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 POLE2P56282 527 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 RNF180Q86T96 592 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 COPS7BQ9H9Q2 264 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-237ENST00000534579 KRCC1Q9NPI7 259 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-237ENST00000534579 LATS2Q9NRM7 1088 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 NDE1Q9NXR1 346 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 CD274Q9NZQ7 290 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 AKAP7Q9P0M2 348 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-237ENST00000534579 SNX9Q9Y5X1 595 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 SLC30A1Q9Y6M5 507 aa9.24□□□□□ -0.93
CTNND1-237ENST00000534579 RASSF10A6NK89 507 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 RGL2O15211 777 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 SLC16A3O15427 465 aaKnown RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 HPGDP15428 266 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ATP6V1C1P21283 382 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 GTF2E2P29084 291 aaKnown RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 TWF1Q12792 350 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 TOMM20Q15388 145 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ALS2CLQ60I27 953 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 VN1R5Q7Z5H4 357 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 JADE3Q92613 823 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 PPP1R36Q96LQ0 422 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 TRIM8Q9BZR9 551 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 RAB23Q9ULC3 237 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 A0A1B0GW55 424 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 TTC26A0AVF1 554 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 MIF4GDA9UHW6 222 aaKnown RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 TADA3O75528 432 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 DUX4L2P0CJ85 424 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 DUX4L3P0CJ86 424 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 DUX4L4P0CJ87 422 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 DUX4L5P0CJ88 424 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 DUX4L6P0CJ89 424 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 DUX4L7P0CJ90 424 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ALOX15P16050 662 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 NCKAP1LP55160 1127 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 HIST2H2ACQ16777 129 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 HIST2H2AA3Q6FI13 130 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ZSCAN18Q8TBC5 510 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 USP33Q8TEY7 942 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 DUX4Q9UBX2 424 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 SLC39A10Q9ULF5 831 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 TMX2Q9Y320 296 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 CTIFO43310 598 aaKnown RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 RPA1P27694 616 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 GCLCP48506 637 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 CASP7P55210 303 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 NPEPPSP55786 919 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ACTR2P61160 394 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 SLC7A5Q01650 507 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ZC2HC1CQ53FD0 456 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ICE2Q659A1 982 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ZNF614Q8N883 585 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 APOL5Q9BWW9 433 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 FAM96AQ9H5X1 160 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 KLF15Q9UIH9 416 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 SYNGAP1Q96PV0 1343 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 EIF3DO15371 548 aaKnown RBP eCLIP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 SYNCRIPO60506 623 aaKnown RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ERN1O75460 977 aaKnown RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 YWHAZP63104 245 aaKnown RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 RBP5P82980 135 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 TMEM132BQ14DG7 1078 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 E2F5Q15329 346 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 SNRNP35Q16560 246 aaKnown RBP9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ATF7IP2Q5U623 682 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 FAM83AQ86UY5 434 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 CAMKK1Q8N5S9 505 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ZNF555Q8NEP9 628 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 AGR3Q8TD06 166 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 ELMO2Q96JJ3 720 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 GLT1D1Q96MS3 346 aa9.23□□□□□ -0.93
CTNND1-237ENST00000534579 SALL1Q9NSC2 1324 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 APOL1O14791 398 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 MSH4O15457 936 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 CYP26A1O43174 497 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 NDUFS3O75489 264 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 ITGA4P13612 1032 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 VCLP18206 1134 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.932e-8■■■□□ 16.9
CTNND1-237ENST00000534579 KPNA1P52294 538 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-237ENST00000534579 TRIM72Q6ZMU5 477 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 ATPAF2Q8N5M1 289 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 UCMAQ8WVF2 138 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 RNF25Q96BH1 459 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-237ENST00000534579 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
CTNND1-237ENST00000534579 CPA4Q9UI42 421 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 PPIEQ9UNP9 301 aaKnown RBP9.22□□□□□ -0.93
CTNND1-237ENST00000534579 ATP11BQ9Y2G3 1177 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 RRN3P2A6NIE6 340 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 PWP1Q13610 501 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 SHROOM1Q2M3G4 852 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-237ENST00000534579 USP39Q53GS9 565 aaKnown RBP9.22□□□□□ -0.93
CTNND1-237ENST00000534579 PTRHD1Q6GMV3 140 aaKnown RBP9.22□□□□□ -0.93
CTNND1-237ENST00000534579 USP49Q70CQ1 688 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 GMCL1P1Q8NEA9 526 aa9.22□□□□□ -0.93
CTNND1-237ENST00000534579 DIS3LQ8TF46 1054 aaKnown RBP9.22□□□□□ -0.93
CTNND1-237ENST00000534579 IP6K2Q9UHH9 426 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms