RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 SCAPQ12770 1279 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 ZKSCAN8Q15776 578 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-219ENST00000534049 DPY19L2P1Q6NXN4 242 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 CLNKQ7Z7G1 428 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 TTC7BQ86TV6 843 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 PNMA8AQ86V59 439 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-219ENST00000534049 ADGRG3Q86Y34 549 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 LNX2Q8N448 690 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 SLC44A3Q8N4M1 653 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 IFI44Q8TCB0 444 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 PTCD3Q96EY7 689 aaKnown RBP5.05□□□□□ -1.6
ITGB1-219ENST00000534049 MARS2Q96GW9 593 aaKnown RBP5.05□□□□□ -1.6
ITGB1-219ENST00000534049 TEKT5Q96M29 485 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 Q96MF0 132 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 CCDC94Q9BW85 323 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-219ENST00000534049 SLC52A1Q9NWF4 448 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 JKAMPQ9P055 326 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 LRIT1Q9P2V4 623 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 IPPQ9Y573 584 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 GPATCH8Q9UKJ3 1502 aaKnown RBP5.05□□□□□ -1.6
ITGB1-219ENST00000534049 PREX1Q8TCU6 1659 aa5.05□□□□□ -1.6
ITGB1-219ENST00000534049 ATP7AQ04656 1500 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 TRGV11A0A075B6L2 103 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 A0A1W2PS29 197 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 GRM6O15303 877 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 HTRA2O43464 458 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 DTNBO60941 627 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 ARIH2O95376 493 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 MPLP40238 635 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 ELLP55199 621 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 AMPD3Q01432 767 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 KIF23Q02241 960 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 MAP2K1Q02750 393 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 ZNF844Q08AG5 666 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 FOXI1Q12951 378 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 TARDBPQ13148 414 aaKnown RBP eCLIP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 ABCB5Q2M3G0 1257 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 ZNF365Q70YC5 407 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 NBPF5PQ86XG9 351 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 PRPF38AQ8NAV1 312 aaKnown RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 HEPHQ9BQS7 1158 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 DUSP26Q9BV47 211 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 SYNPO2LQ9H987 977 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 UNKLQ9H9P5 680 aaKnown RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 SIDT1Q9NXL6 827 aaKnown RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 PTGFRNQ9P2B2 879 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 USP25Q9UHP3 1055 aa5.04□□□□□ -1.6
ITGB1-219ENST00000534049 ZHX1Q9UKY1 873 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-219ENST00000534049 C3P01024 1663 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 CCDC151A5D8V7 595 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 GOLIM4O00461 696 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 KIAA0355O15063 1070 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 KIF1CO43896 1103 aaKnown RBP5.03□□□□□ -1.6
ITGB1-219ENST00000534049 SLC43A1O75387 559 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 FTH1P19P0C7X4 201 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 CCND1P24385 295 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 CD38P28907 300 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 CDKN1CP49918 316 aaPredicted RBP5.03□□□□□ -1.6
ITGB1-219ENST00000534049 NOMO3P69849 1222 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 MRPS35P82673 323 aaKnown RBP5.03□□□□□ -1.6
ITGB1-219ENST00000534049 SLFN5Q08AF3 891 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 NBPF8Q3BBV2 869 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 NOMO2Q5JPE7 1267 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 THEMIS2Q5TEJ8 643 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 CREBRFQ8IUR6 639 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 MIER2Q8N344 545 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 MNS1Q8NEH6 495 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 COA7Q96BR5 231 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 MRGPRX4Q96LA9 322 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 AIFM2Q9BRQ8 373 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 BRINP2Q9C0B6 783 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 RLIMQ9NVW2 624 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 KCTD5Q9NXV2 234 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 TLK1Q9UKI8 766 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 POLHQ9Y253 713 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 PCDHA13Q9Y5I0 950 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 COX11Q9Y6N1 276 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 CEP162Q5TB80 1403 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 AATKQ6ZMQ8 1374 aa5.03□□□□□ -1.6
ITGB1-219ENST00000534049 ZNF142P52746 1687 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 MYO3AQ8NEV4 1616 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PRAMEF33A0A0G2JMD5 474 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC154A6NI56 674 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 VGLL3A8MV65 326 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 E7ENX8 843 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 FZD9O00144 591 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PEX1O43933 1283 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PCDHGA12O60330 932 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PRAMEF10O60809 474 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 KATNA1O75449 491 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PRSS23O95084 383 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 CD1AP06126 327 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 SRGNP10124 158 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 NEFHP12036 1026 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 FCER1AP12319 257 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 KCNA2P16389 499 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 CYP2C19P33261 490 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 RPS7P62081 194 aaKnown RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 TAP2Q03519 686 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 TLE1Q04724 770 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms