RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 PI4K2AQ9BTU6 479 aa14.39□□□□□ -0.11
CMTM1-219ENST00000533953 PHF7Q9BWX1 381 aaPredicted RBP14.39□□□□□ -0.11
CMTM1-219ENST00000533953 PRKD2Q9BZL6 878 aa14.39□□□□□ -0.11
CMTM1-219ENST00000533953 XYLT2Q9H1B5 865 aa14.39□□□□□ -0.11
CMTM1-219ENST00000533953 PIDD1Q9HB75 910 aa14.39□□□□□ -0.11
CMTM1-219ENST00000533953 GDAP2Q9NXN4 497 aa14.39□□□□□ -0.11
CMTM1-219ENST00000533953 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
CMTM1-219ENST00000533953 FAM50BQ9Y247 325 aa14.39□□□□□ -0.11
CMTM1-219ENST00000533953 NME7Q9Y5B8 376 aa14.39□□□□□ -0.11
CMTM1-219ENST00000533953 PLXNA3P51805 1871 aa14.39□□□□□ -0.11
CMTM1-219ENST00000533953 OR6C75A6NL08 312 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 PSMA7O14818 248 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 HUS1O60921 280 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 ATP2C2O75185 946 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 CLSTN1O94985 981 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 PDGFRBP09619 1106 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 KRT13P13646 458 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 ATF2P15336 505 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 MTHFRP42898 656 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 RAP1GAPP47736 663 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 CDH8P55286 799 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 MYO1EQ12965 1108 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 DUSP4Q13115 394 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 STIM1Q13586 685 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 NCOA4Q13772 614 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 WDR72Q3MJ13 1102 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 SPOPLQ6IQ16 392 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 THEM5Q8N1Q8 247 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 HDAC7Q8WUI4 952 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 KBTBD7Q8WVZ9 684 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 RIPOR3Q96MK2 946 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 ZCWPW1Q9H0M4 648 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 NUP62CLQ9H1M0 184 aa14.38□□□□□ -0.11
CMTM1-219ENST00000533953 DDX43Q9NXZ2 648 aaKnown RBP14.38□□□□□ -0.11
CMTM1-219ENST00000533953 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
CMTM1-219ENST00000533953 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 C2CD4DB7Z1M9 353 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 NRG2O14511 850 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-219ENST00000533953 N4BP1O75113 896 aaKnown RBP14.37□□□□□ -0.11
CMTM1-219ENST00000533953 HLA-DRAP01903 254 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 PAX3P23760 479 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 FKBP3Q00688 224 aaKnown RBP14.37□□□□□ -0.11
CMTM1-219ENST00000533953 GPR17Q13304 367 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 ZACNQ401N2 412 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 SCARA5Q6ZMJ2 495 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 C15orf39Q6ZRI6 1047 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 INTS8Q75QN2 995 aaKnown RBP14.37□□□□□ -0.11
CMTM1-219ENST00000533953 ZC3H3Q8IXZ2 948 aaKnown RBP14.37□□□□□ -0.11
CMTM1-219ENST00000533953 ADGRF2Q8IZF7 708 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 CMASQ8NFW8 434 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-219ENST00000533953 TAS1R2Q8TE23 839 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 SDCBP2Q9H190 292 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 SMYD3Q9H7B4 428 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 ZDHHC7Q9NXF8 308 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 DNMT3BQ9UBC3 853 aaKnown RBP14.37□□□□□ -0.11
CMTM1-219ENST00000533953 DPP7Q9UHL4 492 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 DSEQ9UL01 958 aa14.37□□□□□ -0.11
CMTM1-219ENST00000533953 MTMR11A4FU01 709 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 LOC730098B7Z3J9 87 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 MAPK13O15264 365 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 C1RP00736 705 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 EPB41P11171 864 aaKnown RBP14.36□□□□□ -0.11
CMTM1-219ENST00000533953 PSMC1P62191 440 aaKnown RBP14.36□□□□□ -0.11
CMTM1-219ENST00000533953 LRRC63Q05C16 580 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 TWF1Q12792 350 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
CMTM1-219ENST00000533953 TCERG1LQ5VWI1 586 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 TPGS2Q68CL5 300 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 ELMSAN1Q6PJG2 1045 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 LIMS2Q7Z4I7 341 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 TCEAL8Q8IYN2 117 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 HS6ST3Q8IZP7 471 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 TOP6BLQ8N6T0 577 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 GPR152Q8TDT2 470 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 SEMA4DQ92854 862 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 SRRTQ9BXP5 876 aaKnown RBP14.36□□□□□ -0.11
CMTM1-219ENST00000533953 RHOBTB2Q9BYZ6 727 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 GTPBP4Q9BZE4 634 aaKnown RBP14.36□□□□□ -0.11
CMTM1-219ENST00000533953 CEP72Q9P209 647 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 PRKAG3Q9UGI9 489 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 GTF3C4Q9UKN8 822 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 INSL5Q9Y5Q6 135 aa14.36□□□□□ -0.11
CMTM1-219ENST00000533953 VCANP13611 3396 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 ARHGEF37A1IGU5 675 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 MYBPHLA2RUH7 354 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 GOLGA6L22H0YM25 854 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 TNFRSF10AO00220 468 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 GABRDO14764 452 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 IKBKBO14920 756 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 PIK3CAP42336 1068 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 GPR15P49685 360 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 AP3M2P53677 418 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 TNNC1P63316 161 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 PAK1Q13153 545 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 UVSSAQ2YD98 709 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 ZNF699Q32M78 642 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 DPCR1Q3MIW9 517 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 CBWD6Q4V339 395 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 CBWD3Q5JTY5 395 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms