RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.26■□□□□ 0.99
CHEK1-215ENST00000533778 ADGRF2Q8IZF7 708 aa21.26■□□□□ 0.99
CHEK1-215ENST00000533778 SLC35C1Q96A29 364 aa21.26■□□□□ 0.99
CHEK1-215ENST00000533778 THAP9Q9H5L6 903 aa21.26■□□□□ 0.99
CHEK1-215ENST00000533778 NXF1Q9UBU9 619 aaKnown RBP21.26■□□□□ 0.99
CHEK1-215ENST00000533778 FBXW11Q9UKB1 542 aa21.26■□□□□ 0.99
CHEK1-215ENST00000533778 ABLIM3O94929 683 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 SPATA31D3P0C874 917 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 ATF2P15336 505 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 TFF2Q03403 129 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 SMARCB1Q12824 385 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 UVSSAQ2YD98 709 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 SPATA31D4Q6ZUB0 917 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 CCDC149Q6ZUS6 474 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 LIMS2Q7Z4I7 341 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 DCP1BQ8IZD4 617 aaKnown RBP21.25■□□□□ 0.99
CHEK1-215ENST00000533778 FBXL13Q8NEE6 735 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 ENOX1Q8TC92 643 aaKnown RBP21.25■□□□□ 0.99
CHEK1-215ENST00000533778 TAS1R2Q8TE23 839 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 ASB2Q96Q27 587 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 MED15Q96RN5 788 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 ACBD6Q9BR61 282 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 NAT10Q9H0A0 1025 aaKnown RBP21.25■□□□□ 0.99
CHEK1-215ENST00000533778 ZDHHC7Q9NXF8 308 aa21.25■□□□□ 0.99
CHEK1-215ENST00000533778 DDX43Q9NXZ2 648 aaKnown RBP21.25■□□□□ 0.99
CHEK1-215ENST00000533778 MAGEC2Q9UBF1 373 aaPredicted RBP21.25■□□□□ 0.99
CHEK1-215ENST00000533778 AFF4Q9UHB7 1163 aaKnown RBP21.25■□□□□ 0.99
CHEK1-215ENST00000533778 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.25■□□□□ 0.99
CHEK1-215ENST00000533778 MYO7AQ13402 2215 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 WDR27A2RRH5 827 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 GABRDO14764 452 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 PMM2O15305 246 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 TACC1O75410 805 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 ASS1P00966 412 aaKnown RBP21.24■□□□□ 0.99
CHEK1-215ENST00000533778 PCSK1P29120 753 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 TSPY1Q01534 308 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 TYRO3Q06418 890 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 GPR17Q13304 367 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 SMAD4Q13485 552 aaKnown RBP21.24■□□□□ 0.99
CHEK1-215ENST00000533778 WDR44Q5JSH3 913 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 SYCE2Q6PIF2 218 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 CYP26C1Q6V0L0 522 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 CREBRFQ8IUR6 639 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 TRIM59Q8IWR1 403 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 SMRP1Q8NCR6 262 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 CMASQ8NFW8 434 aaPredicted RBP21.24■□□□□ 0.99
CHEK1-215ENST00000533778 FAXDC2Q96IV6 333 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 ADAM7Q9H2U9 754 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 SNX25Q9H3E2 840 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 RAB20Q9NX57 234 aa21.24■□□□□ 0.99
CHEK1-215ENST00000533778 P4HA2O15460 535 aa21.23■□□□□ 0.99
CHEK1-215ENST00000533778 ZMYND10O75800 440 aa21.23■□□□□ 0.99
CHEK1-215ENST00000533778 WARSP23381 471 aaKnown RBP21.23■□□□□ 0.99
CHEK1-215ENST00000533778 CLUL1Q15846 466 aa21.23■□□□□ 0.99
CHEK1-215ENST00000533778 PTCRAQ6ISU1 281 aaPredicted RBP21.23■□□□□ 0.99
CHEK1-215ENST00000533778 OR10T2Q8NGX3 314 aa21.23■□□□□ 0.99
CHEK1-215ENST00000533778 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.23■□□□□ 0.99
CHEK1-215ENST00000533778 CNOT6LQ96LI5 555 aaKnown RBP21.23■□□□□ 0.99
CHEK1-215ENST00000533778 ZCWPW1Q9H0M4 648 aa21.23■□□□□ 0.99
CHEK1-215ENST00000533778 S1PR5Q9H228 398 aa21.23■□□□□ 0.99
CHEK1-215ENST00000533778 COQ4Q9Y3A0 265 aa21.23■□□□□ 0.99
CHEK1-215ENST00000533778 PRRG1O14668 218 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 C8AP07357 584 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 HNRNPA1P09651 372 aaKnown RBP eCLIP21.22■□□□□ 0.99
CHEK1-215ENST00000533778 HOXA9P31269 272 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 GNL1P36915 607 aaPredicted RBP21.22■□□□□ 0.99
CHEK1-215ENST00000533778 FMO5P49326 533 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 CBWD6Q4V339 395 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 CBWD3Q5JTY5 395 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 CBWD5Q5RIA9 395 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 PPM1LQ5SGD2 360 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 ATAT1Q5SQI0 421 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 RARS2Q5T160 578 aaKnown RBP21.22■□□□□ 0.99
CHEK1-215ENST00000533778 TCEAL8Q8IYN2 117 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 C2orf15Q8WU43 125 aaKnown RBP21.22■□□□□ 0.99
CHEK1-215ENST00000533778 RIPOR3Q96MK2 946 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 RTP3Q9BQQ7 232 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 CYP4F11Q9HBI6 524 aa21.22■□□□□ 0.99
CHEK1-215ENST00000533778 ATG2AQ2TAZ0 1938 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 CCDC195A0A1B0GUA6 201 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 GRXCR2A6NFK2 248 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 AFPP02771 609 aaKnown RBP21.21■□□□□ 0.99
CHEK1-215ENST00000533778 OR4Q2P0C623 313 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 MTIF2P46199 727 aaKnown RBP21.21■□□□□ 0.99
CHEK1-215ENST00000533778 NOP14P78316 857 aaKnown RBP21.21■□□□□ 0.99
CHEK1-215ENST00000533778 ADCY1Q08828 1119 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 KCNH2Q12809 1159 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 NFE2Q16621 373 aaPredicted RBP21.21■□□□□ 0.99
CHEK1-215ENST00000533778 RNF19BQ6ZMZ0 732 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 C12orf76Q8N812 135 aaPredicted RBP21.21■□□□□ 0.99
CHEK1-215ENST00000533778 OR6B3Q8NGW1 331 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 SLC7A14Q8TBB6 771 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 KBTBD7Q8WVZ9 684 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 NECTIN4Q96NY8 510 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 PI4K2AQ9BTU6 479 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 RHOBTB2Q9BYZ6 727 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 HSFX1Q9UBD0 423 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 CDH9Q9ULB4 789 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 POLIQ9UNA4 740 aa21.21■□□□□ 0.99
CHEK1-215ENST00000533778 NFE2L3Q9Y4A8 694 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms