RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CYP4F8P98187 520 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 STK3Q13188 491 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 NR5A1Q13285 461 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 UAP1L1Q3KQV9 507 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 TRIM68Q6AZZ1 485 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 C19orf48Q6RUI8 117 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 DNAJB7Q7Z6W7 309 aaPredicted RBP13.45□□□□□ -0.26
SVIP-205ENST00000533774 CATSPER3Q86XQ3 398 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 CAMKK1Q8N5S9 505 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 RIN3Q8TB24 985 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 DEPTORQ8TB45 409 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 FAM83CQ9BQN1 747 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 ATXN3LQ9H3M9 355 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 PTPRHQ9HD43 1115 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 GKN1Q9NS71 199 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 TNFSF13BQ9Y275 285 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 MSRB2Q9Y3D2 182 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 NUB1Q9Y5A7 615 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 ASH1LQ9NR48 2969 aaKnown RBP13.45□□□□□ -0.26
SVIP-205ENST00000533774 SHROOM3Q8TF72 1996 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 ANTXRLA6NF34 631 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 ABLIM1O14639 778 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 RHOBTB1O94844 696 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 KCNE1P15382 129 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 BCKDHBP21953 392 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 GABRR2P28476 465 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 MCM4P33991 863 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 TXKP42681 527 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 CDR1P51861 262 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 ELF2Q15723 593 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 CALCRLQ16602 461 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 BMP2KLQ5H9B9 411 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 PMS2CLQ68D20 193 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 CENPPQ6IPU0 288 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 TAS1R3Q7RTX0 852 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 HAUS6Q7Z4H7 955 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 ATAD1Q8NBU5 361 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 MTMR9Q96QG7 549 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 NAP1L4Q99733 375 aaKnown RBP13.44□□□□□ -0.26
SVIP-205ENST00000533774 ACO2Q99798 780 aaKnown RBP13.44□□□□□ -0.26
SVIP-205ENST00000533774 EBF3Q9H4W6 596 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 IL21Q9HBE4 155 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 SLC38A7Q9NVC3 462 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 GPSM3Q9Y4H4 160 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 APC2O95996 2303 aa13.44□□□□□ -0.26
SVIP-205ENST00000533774 HELZP42694 1942 aaKnown RBP13.43□□□□□ -0.26
SVIP-205ENST00000533774 SPAARA0A1B0GVQ0 90 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 CPLX1O14810 134 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
SVIP-205ENST00000533774 ATG13O75143 517 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 OAZ2O95190 189 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 ARSAP15289 507 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 CYP11B2P19099 503 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 WEE1P30291 646 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
SVIP-205ENST00000533774 MCM2P49736 904 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 GALK1P51570 392 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 EPHB3P54753 998 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 GRSF1Q12849 480 aaKnown RBP eCLIP13.43□□□□□ -0.26
SVIP-205ENST00000533774 RUNX3Q13761 415 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 APPL2Q8NEU8 664 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 RPLP0P6Q8NHW5 317 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 PSMG2Q969U7 264 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 BBC3Q96PG8 261 aaPredicted RBP13.43□□□□□ -0.26
SVIP-205ENST00000533774 SLC46A2Q9BY10 475 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 TASP1Q9H6P5 420 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 CNTN3Q9P232 1028 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 TUBGCP4Q9UGJ1 667 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 EBF1Q9UH73 591 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 CCL26Q9Y258 94 aa13.43□□□□□ -0.26
SVIP-205ENST00000533774 PCDH15Q96QU1 1955 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 MTMR11A4FU01 709 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 M0QZQ0 153 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 KHNYNO15037 678 aaKnown RBP13.42□□□□□ -0.26
SVIP-205ENST00000533774 GBP1P32455 592 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 YARSP54577 528 aaKnown RBP13.42□□□□□ -0.26
SVIP-205ENST00000533774 FAM193AP78312 1265 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
SVIP-205ENST00000533774 GPR17Q13304 367 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 DMC1Q14565 340 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 PROSER1Q86XN7 944 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 ZNF274Q96GC6 653 aaPredicted RBP13.42□□□□□ -0.26
SVIP-205ENST00000533774 LPIN3Q9BQK8 851 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 CCDC94Q9BW85 323 aaPredicted RBP13.42□□□□□ -0.26
SVIP-205ENST00000533774 TPSD1Q9BZJ3 242 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 TOPORSQ9NS56 1045 aaPredicted RBP13.42□□□□□ -0.26
SVIP-205ENST00000533774 TPCN1Q9ULQ1 816 aa13.42□□□□□ -0.26
SVIP-205ENST00000533774 APBB3O95704 486 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 PROZP22891 400 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 ALDH1A3P47895 512 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 DGKEP52429 567 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 PLD1Q13393 1074 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 KARSQ15046 597 aaKnown RBP13.41□□□□□ -0.26
SVIP-205ENST00000533774 SLC10A6Q3KNW5 377 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 ZNF568Q3ZCX4 644 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 SEZ6Q53EL9 994 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 RUFY3Q7L099 469 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms