RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SH3GL3Q99963 347 aa11.83□□□□□ -0.52
AMBRA1-211ENST00000533727 RRN3Q9NYV6 651 aa11.83□□□□□ -0.52
AMBRA1-211ENST00000533727 ZNF212Q9UDV6 495 aa11.83□□□□□ -0.52
AMBRA1-211ENST00000533727 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-211ENST00000533727 PALMO75781 387 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 CKMP06732 381 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 GPD1P21695 349 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 RARRES1P49788 294 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 NXNQ6DKJ4 435 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 SPOPLQ6IQ16 392 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 SYN2Q92777 582 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 FBXO44Q9H4M3 255 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 FAM49BQ9NUQ9 324 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 ANGPTL2Q9UKU9 493 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 ATP8A1Q9Y2Q0 1164 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 DFFAO00273 331 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 EEF2KO00418 725 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 USP2O75604 605 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 KLRC2P26717 231 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 YWHAHQ04917 246 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 DGKZQ13574 1117 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 GIT2Q14161 759 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 HERC6Q8IVU3 1022 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 FOPNLQ96NB1 174 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 ZCCHC17Q9NP64 241 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 OLA1Q9NTK5 396 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 UBIAD1Q9Y5Z9 338 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 AKAP12Q02952 1782 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 TTC26A0AVF1 554 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 C3orf70A6NLC5 250 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 CFAP99D6REC4 459 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 RGS7P49802 495 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 NTRK3Q16288 839 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 IL31Q6EBC2 164 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 CES5AQ6NT32 575 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 NOP9Q86U38 636 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 TMEM134Q9H6X4 195 aa11.82□□□□□ -0.52
AMBRA1-211ENST00000533727 A0A1W2PQJ5 194 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 MBL2P11226 248 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 RALBP11234 206 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 C2orf54Q08AI8 447 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 PDK1Q15118 436 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 TMED2Q15363 201 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 KLHL38Q2WGJ6 581 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 OVOS1Q6IE37 1185 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 SYDE1Q6ZW31 735 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 OTOP1Q7RTM1 612 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 SRLQ86TD4 932 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 LRRC43Q8N309 656 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 SPDL1Q96EA4 605 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 BAG5Q9UL15 447 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 YDJCA8MPS7 323 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 E5RI56 91 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 APLP1P51693 650 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 ZNF177Q13360 481 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 CDH18Q13634 790 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 DUSP28Q4G0W2 176 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 BOLA3Q53S33 107 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 CXCL17Q6UXB2 119 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 ZNF720Q7Z2F6 126 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 TMEM86AQ8N2M4 240 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 FIBCD1Q8N539 461 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 MCUQ8NE86 351 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 TTC8Q8TAM2 541 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 FMO2Q99518 471 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 DRC3Q9H069 523 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 DOLKQ9UPQ8 538 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 FAM187AA6NFU0 413 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 SMAPO00193 183 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 TMCC1O94876 653 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 ANKRD20A4Q4UJ75 823 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 ANKRD20A8PQ5CZ79 823 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 ANKRD20A2Q5SQ80 823 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 ANKRD20A1Q5TYW2 823 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 CAPRIN2Q6IMN6 1127 aaKnown RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 GPAT2Q6NUI2 795 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 CXorf56Q9H5V9 222 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 NMRK2Q9NPI5 230 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 EXOC1LA0A1B0GW35 172 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 NFKBIEO00221 500 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 SNX2O60749 519 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 RTN3O95197 1032 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 GEMIN4P57678 1058 aaKnown RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 ACTN3Q08043 901 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 PPIGQ13427 754 aaKnown RBP eCLIP11.81□□□□□ -0.523e-7■■□□□ 12
AMBRA1-211ENST00000533727 RCN2Q14257 317 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 PKN1Q16512 942 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 SLC18A3Q16572 532 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 PID1Q7Z2X4 250 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 CFAP36Q96G28 342 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 DEFB118Q96PH6 123 aa11.81□□□□□ -0.52
AMBRA1-211ENST00000533727 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms