RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SMARCD2Q92925 531 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 IRF7Q92985 503 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 DNAJC19Q96DA6 116 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 ZBTB45Q96K62 511 aaPredicted RBP9.45□□□□□ -0.9
COPB1-210ENST00000533533 ZSWIM3Q96MP5 696 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 ACAP3Q96P50 834 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 IER2Q9BTL4 223 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 TRIM9Q9C026 710 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 MAGEF1Q9HAY2 307 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 ZNF334Q9HCZ1 680 aaPredicted RBP9.45□□□□□ -0.9
COPB1-210ENST00000533533 TRPV5Q9NQA5 729 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 KBTBD4Q9NVX7 518 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 SEL1LQ9UBV2 794 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 FBXL5Q9UKA1 691 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 GMEB2Q9UKD1 530 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 CDV3Q9UKY7 258 aaKnown RBP9.45□□□□□ -0.9
COPB1-210ENST00000533533 MAFFQ9ULX9 164 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 TBX20Q9UMR3 447 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 USP18Q9UMW8 372 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 NUB1Q9Y5A7 615 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 FAM208BQ5VWN6 2430 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 ANK1P16157 1881 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 A0A1W2PQ27 194 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 A0A1W2PQ64 194 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 A0A1W2PQD8 194 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 ABLIM1O14639 778 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 MOSPD3O75425 235 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 TOM1L1O75674 476 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 SLFN14P0C7P3 912 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 MCF2P10911 925 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 PROZP22891 400 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 GDI1P31150 447 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 ABCD1P33897 745 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 VIPR2P41587 438 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 CCR3P51677 355 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 EPHA5P54756 1037 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 CUL4BQ13620 913 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 PPP2R5DQ14738 602 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 NOLC1Q14978 699 aaKnown RBP eCLIP9.44□□□□□ -0.9
COPB1-210ENST00000533533 CTXN3Q4LDR2 81 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 SEZ6Q53EL9 994 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 IQCEQ6IPM2 695 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 ZNF280DQ6N043 979 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 VITQ6UXI7 678 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 ZPBP2Q6X784 338 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 HS6ST3Q8IZP7 471 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 CELF5Q8N6W0 485 aaKnown RBP9.44□□□□□ -0.9
COPB1-210ENST00000533533 LEMD2Q8NC56 503 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 APPL2Q8NEU8 664 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 SLC39A7Q92504 469 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 FAM3CQ92520 227 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 HPS3Q969F9 1004 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 C18orf25Q96B23 403 aaPredicted RBP9.44□□□□□ -0.9
COPB1-210ENST00000533533 SUSD3Q96L08 255 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 ZNF512Q96ME7 567 aaPredicted RBP9.44□□□□□ -0.9
COPB1-210ENST00000533533 CNTNAP3BQ96NU0 1288 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 RTKNQ9BST9 563 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 CNTNAP3Q9BZ76 1288 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 GOLPH3LQ9H4A5 285 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 LMAN1LQ9HAT1 526 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 TRPV4Q9HBA0 871 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 PARD6AQ9NPB6 346 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 CEP72Q9P209 647 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 CNTN3Q9P232 1028 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 AFF4Q9UHB7 1163 aaKnown RBP9.44□□□□□ -0.9
COPB1-210ENST00000533533 USP25Q9UHP3 1055 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 RAB23Q9ULC3 237 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 EXOC7Q9UPT5 735 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 PCDHB13Q9Y5F0 798 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 PIAS3Q9Y6X2 628 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 ZNF638Q14966 1978 aaKnown RBP9.44□□□□□ -0.9
COPB1-210ENST00000533533 GON4LQ3T8J9 2241 aa9.44□□□□□ -0.9
COPB1-210ENST00000533533 KIF26AQ9ULI4 1882 aaPredicted RBP9.43□□□□□ -0.9
COPB1-210ENST00000533533 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 ZNF263O14978 683 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 MEFVO15553 781 aaPredicted RBP9.43□□□□□ -0.9
COPB1-210ENST00000533533 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
COPB1-210ENST00000533533 PRPF6O94906 941 aaKnown RBP9.43□□□□□ -0.9
COPB1-210ENST00000533533 ZNF202O95125 648 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 C7P10643 843 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 MYL4P12829 197 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 SCP2P22307 547 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 MCM4P33991 863 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 MLLT6P55198 1093 aaPredicted RBP9.43□□□□□ -0.9
COPB1-210ENST00000533533 GTF2BQ00403 316 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 TWF1Q12792 350 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 LAIR1Q6GTX8 287 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 UNC13DQ70J99 1090 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 ZNF720Q7Z2F6 126 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 MFSD6LQ8IWD5 586 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 ZSCAN18Q8TBC5 510 aaPredicted RBP9.43□□□□□ -0.9
COPB1-210ENST00000533533 DEPDC1BQ8WUY9 529 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 CCDC47Q96A33 483 aaKnown RBP9.43□□□□□ -0.9
COPB1-210ENST00000533533 FAM212AQ96EL1 285 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 PAGE5Q96GU1 130 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 CCDC34Q96HJ3 373 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 ACCSQ96QU6 501 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 C7orf25Q9BPX7 421 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 MSTO1Q9BUK6 570 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms