RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 IMPG2Q9BZV3 1241 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SMYD3Q9H7B4 428 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 VRTNQ9H8Y1 702 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 FNIP2Q9P278 1114 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 DSEQ9UL01 958 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 STXBP5LQ9Y2K9 1186 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 COQ4Q9Y3A0 265 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SPTBN5Q9NRC6 3674 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TSC2P49815 1807 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ARHGEF37A1IGU5 675 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SMTNL1A8MU46 457 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 H7C4K7 107 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ADH1AP07327 375 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 OR4Q2P0C623 313 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ATP1A3P13637 1013 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CDK11BP21127 795 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 KRT31Q15323 416 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 VWA3BQ502W6 1294 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 MIIPQ5JXC2 388 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ZNF280DQ6N043 979 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 OSTM1Q86WC4 334 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 GPR65Q8IYL9 337 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TOP6BLQ8N6T0 577 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 VN1R2Q8NFZ6 395 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 TAF4BQ92750 862 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 VPS16Q9H269 839 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 BACE2Q9Y5Z0 518 aa12.78□□□□□ -0.36
TRAF3IP2-212ENST00000532708 BRWD1Q9NSI6 2320 aa12.77□□□□□ -0.36
TRAF3IP2-212ENST00000532708 C5orf42Q9H799 3197 aa12.77□□□□□ -0.36
TRAF3IP2-212ENST00000532708 N4BP1O75113 896 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 WEE2P0C1S8 567 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 EPCAMP16422 314 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 ZNF18P17022 549 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 ACAT1P24752 427 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 LMO2P25791 158 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 NDUFV1P49821 464 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CLCN4P51793 760 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 WDR44Q5JSH3 913 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 DPH6Q7L8W6 267 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 LIMS2Q7Z4I7 341 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CCDC150Q8NCX0 1101 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 OR10T2Q8NGX3 314 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 TSPY26PQ9H489 355 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 HCFC2Q9Y5Z7 792 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 PLXNA3P51805 1871 aa12.77□□□□□ -0.37
TRAF3IP2-212ENST00000532708 PMM2O15305 246 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 TGM5O43548 720 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 ASPAP45381 313 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 ROR1Q01973 937 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CREMQ03060 361 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CETN1Q12798 172 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 SLC8B1Q6J4K2 584 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 TMEM86AQ8N2M4 240 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 OR6B3Q8NGW1 331 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 LMO3Q8TAP4 145 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 SLC22A17Q8WUG5 538 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CLDND1Q9NY35 253 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 WDR27A2RRH5 827 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 GABRDO14764 452 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 P4HA2O15460 535 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 GLP2RO95838 553 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 P4HA1P13674 534 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CPB1P15086 417 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 ADAM15Q13444 863 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 KCNC3Q14003 757 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 RAB33AQ14088 237 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 EFHBQ8N7U6 833 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 PGLYRP2Q96PD5 576 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CDCA3Q99618 268 aaPredicted RBP12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 ARID3AQ99856 593 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 GCNT4Q9P109 453 aa12.76□□□□□ -0.37
TRAF3IP2-212ENST00000532708 FSD2A1L4K1 749 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 OR6C75A6NL08 312 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 ATP2C2O75185 946 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 TACC1O75410 805 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CAVIN2O95810 425 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 GLUD1P00367 558 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 CD58P19256 250 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 SLC9A1P19634 815 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 LHX1P48742 406 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 COPB1P53618 953 aaKnown RBP12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 ZNF445P59923 1031 aa12.75□□□□□ -0.37
TRAF3IP2-212ENST00000532708 APBA1Q02410 837 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms