RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 VWA3BQ502W6 1294 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 FAM171A1Q5VUB5 890 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 KRT39Q6A163 491 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 FAM114A1Q8IWE2 563 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 PDCL2Q8N4E4 241 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 LRRC52Q8N7C0 313 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 VN1R2Q8NFZ6 395 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 MYLIPQ8WY64 445 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 TMEM169Q96HH4 297 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 KREMEN1Q96MU8 473 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 UROC1Q96N76 676 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 TWNKQ96RR1 684 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 COLEC11Q9BWP8 271 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 INTS2Q9H0H0 1204 aaKnown RBP8.59□□□□□ -1.03
TRIM49-202ENST00000532501 NDST4Q9H3R1 872 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 CHST7Q9NS84 486 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 SIK3Q9Y2K2 1263 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 SNX9Q9Y5X1 595 aa8.59□□□□□ -1.03
TRIM49-202ENST00000532501 TSC2P49815 1807 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 LGALS16A8MUM7 142 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 M0QZQ0 153 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 CYB561D2O14569 222 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 TBC1D4O60343 1298 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 PHACTR2O75167 634 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 SOD2P04179 222 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 RB1P06400 928 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 WEE2P0C1S8 567 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 PRKCSHP14314 528 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 ACAT1P24752 427 aaKnown RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 LMO2P25791 158 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 EEF1GP26641 437 aaKnown RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 GTF2H1P32780 548 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 FANCCQ00597 558 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 MRPL58Q14197 206 aaKnown RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 ZNF699Q32M78 642 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 PHLDB3Q6NSJ2 640 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 USP37Q86T82 979 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 DDX53Q86TM3 631 aaKnown RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 CEP57Q86XR8 500 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 TTC9BQ8N6N2 239 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 UBR7Q8N806 425 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 FBXL13Q8NEE6 735 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 ANKRD20A12PQ8NF67 263 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 LNX1Q8TBB1 728 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 CACTINQ8WUQ7 758 aaKnown RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 RIN2Q8WYP3 895 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 TCF25Q9BQ70 676 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 C11orf84Q9BUA3 381 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 VRTNQ9H8Y1 702 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 TMLHEQ9NVH6 421 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 RAB20Q9NX57 234 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 GCNT4Q9P109 453 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 NXF1Q9UBU9 619 aaKnown RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 TSR3Q9UJK0 312 aaKnown RBP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 PCDHB12Q9Y5F1 795 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 NLRC5Q86WI3 1866 aa8.58□□□□□ -1.04
TRIM49-202ENST00000532501 SF3B1O75533 1304 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRIM49-202ENST00000532501 C2orf71A6NGG8 1288 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 LRRC10BA6NIK2 292 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 KPNA7A9QM74 516 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 PER2O15055 1255 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 XPOTO43592 962 aaKnown RBP8.57□□□□□ -1.04
TRIM49-202ENST00000532501 ATP2C2O75185 946 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 NOL4O94818 638 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 STAU1O95793 577 aaKnown RBP8.57□□□□□ -1.04
TRIM49-202ENST00000532501 CYP11A1P05108 521 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 CNPP09543 421 aaKnown RBP8.57□□□□□ -1.04
TRIM49-202ENST00000532501 CTSAP10619 480 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 PON1P27169 355 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 PPM1AP35813 382 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 DSG1Q02413 1049 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 SYCP1Q15431 976 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 WDR72Q3MJ13 1102 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 SV2CQ496J9 727 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 ZNF697Q5TEC3 545 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 DSTYKQ6XUX3 929 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.57□□□□□ -1.04
TRIM49-202ENST00000532501 RRAGAQ7L523 313 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 LRRTM3Q86VH5 581 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 WHAMMQ8TF30 809 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 PIK3R5Q8WYR1 880 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 ZNF560Q96MR9 790 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 SAMD11Q96NU1 681 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 TSPAN18Q96SJ8 248 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 CDX2Q99626 313 aaPredicted RBP8.57□□□□□ -1.04
TRIM49-202ENST00000532501 PKMYT1Q99640 499 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 CLSTN3Q9BQT9 956 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 LSM14BQ9BX40 385 aaKnown RBP8.57□□□□□ -1.04
TRIM49-202ENST00000532501 GANQ9H2C0 597 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 CRISPLD1Q9H336 500 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 DPEP3Q9H4B8 488 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 TLR9Q9NR96 1032 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 AAASQ9NRG9 546 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 TMEM30AQ9NV96 361 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 MTMR10Q9NXD2 777 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 GDAP2Q9NXN4 497 aa8.57□□□□□ -1.04
TRIM49-202ENST00000532501 MAGEC2Q9UBF1 373 aaPredicted RBP8.57□□□□□ -1.04
TRIM49-202ENST00000532501 FHOD1Q9Y613 1164 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms