RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 HFE2Q6ZVN8 426 aa24.72■■□□□ 1.55
CAPN1-222ENST00000532285 BMP8AQ7Z5Y6 402 aa24.72■■□□□ 1.55
CAPN1-222ENST00000532285 TMEM86AQ8N2M4 240 aa24.72■■□□□ 1.55
CAPN1-222ENST00000532285 ENGASEQ8NFI3 743 aa24.72■■□□□ 1.55
CAPN1-222ENST00000532285 ITFG1Q8TB96 612 aa24.72■■□□□ 1.55
CAPN1-222ENST00000532285 ZNF512Q96ME7 567 aaPredicted RBP24.72■■□□□ 1.55
CAPN1-222ENST00000532285 RTP3Q9BQQ7 232 aa24.72■■□□□ 1.55
CAPN1-222ENST00000532285 HSFX1Q9UBD0 423 aa24.72■■□□□ 1.55
CAPN1-222ENST00000532285 MTMR11A4FU01 709 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 SMARCB1Q12824 385 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 DUSP4Q13115 394 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 PLD1Q13393 1074 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 SLC39A12Q504Y0 691 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 IQCEQ6IPM2 695 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 TRAPPC11Q7Z392 1133 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 PDCL2Q8N4E4 241 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 SPATA18Q8TC71 538 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 FGF13Q92913 245 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 ASIC4Q96FT7 647 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 HPDLQ96IR7 371 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 CORO1BQ9BR76 489 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 L1RE1Q9UN81 338 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 MRPS23Q9Y3D9 190 aaKnown RBP24.71■■□□□ 1.55
CAPN1-222ENST00000532285 SNX9Q9Y5X1 595 aa24.71■■□□□ 1.55
CAPN1-222ENST00000532285 CALUO43852 315 aaPredicted RBP24.7■■□□□ 1.54
CAPN1-222ENST00000532285 NR3C1P04150 777 aa24.7■■□□□ 1.54
CAPN1-222ENST00000532285 DCP1BQ8IZD4 617 aaKnown RBP24.7■■□□□ 1.54
CAPN1-222ENST00000532285 TOP6BLQ8N6T0 577 aa24.7■■□□□ 1.54
CAPN1-222ENST00000532285 ATAD1Q8NBU5 361 aa24.7■■□□□ 1.54
CAPN1-222ENST00000532285 C2orf15Q8WU43 125 aaKnown RBP24.7■■□□□ 1.54
CAPN1-222ENST00000532285 PBXIP1Q96AQ6 731 aa24.7■■□□□ 1.54
CAPN1-222ENST00000532285 CEP72Q9P209 647 aa24.7■■□□□ 1.54
CAPN1-222ENST00000532285 TRAF3IP3Q9Y228 551 aa24.7■■□□□ 1.54
CAPN1-222ENST00000532285 YIPF1Q9Y548 306 aa24.7■■□□□ 1.54
CAPN1-222ENST00000532285 ANHXE9PGG2 379 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 ZNF197O14709 1029 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 ALDH1A3P47895 512 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 EPHB3P54753 998 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 PNOCQ13519 176 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 DPH6Q7L8W6 267 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 GUF1Q8N442 669 aaKnown RBP24.69■■□□□ 1.54
CAPN1-222ENST00000532285 RSAD2Q8WXG1 361 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 TIGD1Q96MW7 591 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 GZF1Q9H116 711 aaPredicted RBP24.69■■□□□ 1.54
CAPN1-222ENST00000532285 CRISPLD1Q9H336 500 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 SMOC2Q9H3U7 446 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 RMND1Q9NWS8 449 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 HOOK1Q9UJC3 728 aaKnown RBP24.69■■□□□ 1.54
CAPN1-222ENST00000532285 SLC27A5Q9Y2P5 690 aa24.69■■□□□ 1.54
CAPN1-222ENST00000532285 LHX1P48742 406 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 MYL7Q01449 175 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 TSPY1Q01534 308 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 HTR4Q13639 388 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 SLC5A9Q2M3M2 681 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 CYP4A22Q5TCH4 519 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 SLC44A3Q8N4M1 653 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 LEMD2Q8NC56 503 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 PARD3BQ8TEW8 1205 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 ZNF516Q92618 1163 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 ACBD6Q9BR61 282 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 DDX43Q9NXZ2 648 aaKnown RBP24.68■■□□□ 1.54
CAPN1-222ENST00000532285 DUSP12Q9UNI6 340 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 MAPK8IP1Q9UQF2 711 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 FRMD4BQ9Y2L6 1034 aa24.68■■□□□ 1.54
CAPN1-222ENST00000532285 MICAL2O94851 1124 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 TUFMP49411 452 aaKnown RBP24.67■■□□□ 1.54
CAPN1-222ENST00000532285 AP3M2P53677 418 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 NFIL3Q16649 462 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 SOWAHAQ2M3V2 549 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 PRSS36Q5K4E3 855 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 MTSS1LQ765P7 747 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 PDZD4Q76G19 769 aaPredicted RBP24.67■■□□□ 1.54
CAPN1-222ENST00000532285 LRRTM3Q86VH5 581 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 NPAS3Q8IXF0 933 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 SPPL2BQ8TCT7 592 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 ING5Q8WYH8 240 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 GSDMAQ96QA5 445 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 ASAH2Q9NR71 780 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 GDE1Q9NZC3 331 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 ASB3Q9Y575 518 aa24.67■■□□□ 1.54
CAPN1-222ENST00000532285 SMC2O95347 1197 aa24.66■■□□□ 1.54
CAPN1-222ENST00000532285 CST3P01034 146 aaPredicted RBP24.66■■□□□ 1.54
CAPN1-222ENST00000532285 CASP4P49662 377 aa24.66■■□□□ 1.54
CAPN1-222ENST00000532285 EPHA5P54756 1037 aa24.66■■□□□ 1.54
CAPN1-222ENST00000532285 CLDN10P78369 228 aa24.66■■□□□ 1.54
CAPN1-222ENST00000532285 LIMS2Q7Z4I7 341 aa24.66■■□□□ 1.54
CAPN1-222ENST00000532285 ADGRF2Q8IZF7 708 aa24.66■■□□□ 1.54
CAPN1-222ENST00000532285 PLEKHO2Q8TD55 490 aa24.66■■□□□ 1.54
CAPN1-222ENST00000532285 HCN4Q9Y3Q4 1203 aa24.66■■□□□ 1.54
CAPN1-222ENST00000532285 GABRDO14764 452 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 PHACTR2O75167 634 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 PCSK1P29120 753 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 ANP32AP39687 249 aaKnown RBP24.65■■□□□ 1.54
CAPN1-222ENST00000532285 TRPC3Q13507 836 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 NFE2Q16621 373 aaPredicted RBP24.65■■□□□ 1.54
CAPN1-222ENST00000532285 CEP135Q66GS9 1140 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 HS6ST3Q8IZP7 471 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 TTC9BQ8N6N2 239 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 TMC2Q8TDI7 906 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 TCEAL4Q96EI5 215 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms