RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 NEU1Q99519 415 aa5.35□□□□□ -1.55
USP47-211ENST00000531513 CRB3Q9BUF7 120 aa5.35□□□□□ -1.55
USP47-211ENST00000531513 WDR12Q9GZL7 423 aaKnown RBP5.35□□□□□ -1.55
USP47-211ENST00000531513 ARFGAP3Q9NP61 516 aa5.35□□□□□ -1.55
USP47-211ENST00000531513 ALG13Q9NP73 1137 aaKnown RBP5.35□□□□□ -1.55
USP47-211ENST00000531513 DMRT3Q9NQL9 472 aa5.35□□□□□ -1.55
USP47-211ENST00000531513 TERF2IPQ9NYB0 399 aa5.35□□□□□ -1.55
USP47-211ENST00000531513 POGKQ9P215 609 aa5.35□□□□□ -1.55
USP47-211ENST00000531513 LRCH1Q9Y2L9 728 aa5.35□□□□□ -1.55
USP47-211ENST00000531513 USP15Q9Y4E8 981 aaPredicted RBP5.35□□□□□ -1.55
USP47-211ENST00000531513 NR2E3Q9Y5X4 410 aa5.35□□□□□ -1.55
USP47-211ENST00000531513 RHPN2P1A8MT19 583 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 FRS3O43559 492 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 ITGA10O75578 1167 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 ESRRBO95718 433 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 FTLP02792 175 aaPredicted RBP5.34□□□□□ -1.55
USP47-211ENST00000531513 RPLP2P05387 115 aaKnown RBP5.34□□□□□ -1.55
USP47-211ENST00000531513 CDK4P11802 303 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 MYF5P13349 255 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 CASP5P51878 434 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 PPP3CAQ08209 521 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 RESTQ13127 1097 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 TRIM14Q14142 442 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 PDCD2Q16342 344 aaPredicted RBP5.34□□□□□ -1.55
USP47-211ENST00000531513 METRNLQ641Q3 311 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 APOA5Q6Q788 366 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 MIGA2Q7L4E1 593 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 TTC7BQ86TV6 843 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 COL23A1Q86Y22 540 aaPredicted RBP5.34□□□□□ -1.55
USP47-211ENST00000531513 SLC44A3Q8N4M1 653 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 PAF1Q8N7H5 531 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 MDM1Q8TC05 714 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 RGMAQ96B86 450 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 CEP95Q96GE4 821 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 APIPQ96GX9 242 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 PAWRQ96IZ0 340 aaKnown RBP5.34□□□□□ -1.55
USP47-211ENST00000531513 BTBD1Q9H0C5 482 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 PCDHB1Q9Y5F3 818 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 PCDHA13Q9Y5I0 950 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 FPGT-TNNI3KV9GXZ4 949 aa5.34□□□□□ -1.55
USP47-211ENST00000531513 TBKBP1A7MCY6 615 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 GASTP01350 101 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 EGR2P11161 476 aaPredicted RBP5.33□□□□□ -1.56
USP47-211ENST00000531513 ITGAMP11215 1152 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 RPL17P18621 184 aaKnown RBP5.33□□□□□ -1.56
USP47-211ENST00000531513 MPLP40238 635 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 MGAT2Q10469 447 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 MPP3Q13368 585 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 FGL2Q14314 439 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 BMT2Q1RMZ1 405 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 ALFQ53S48 1182 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 CCDC157Q569K6 752 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 DRC7Q8IY82 874 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 OR2I1PQ8NGU4 316 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 PLBD2Q8NHP8 589 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 NSUN6Q8TEA1 469 aaKnown RBP5.33□□□□□ -1.56
USP47-211ENST00000531513 NELL1Q92832 810 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 C22orf23Q9BZE7 217 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 LRRC27Q9C0I9 530 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 ATP6V0A4Q9HBG4 840 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 RBM12Q9NTZ6 932 aaKnown RBP5.33□□□□□ -1.56
USP47-211ENST00000531513 GPRC5DQ9NZD1 345 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.33□□□□□ -1.56
USP47-211ENST00000531513 TPCN1Q9ULQ1 816 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 GTF2A1LQ9UNN4 478 aa5.33□□□□□ -1.56
USP47-211ENST00000531513 FAM171A2A8MVW0 826 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 FOXN3O00409 490 aaPredicted RBP5.32□□□□□ -1.56
USP47-211ENST00000531513 KPNA5O15131 536 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 C1RP00736 705 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 TNFSF4P23510 183 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 PPM1AP35813 382 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 IL6STP40189 918 aaPredicted RBP5.32□□□□□ -1.56
USP47-211ENST00000531513 HK3P52790 923 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 ELLP55199 621 aaPredicted RBP5.32□□□□□ -1.56
USP47-211ENST00000531513 RAB1AP62820 205 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 ZNF543Q08ER8 600 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 SCAPQ12770 1279 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 BIRC3Q13489 604 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 NOMO1Q15155 1222 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 MST1LQ2TV78 715 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 TUBB8Q3ZCM7 444 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 PRAMEF14Q5SWL7 426 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 IZUMO3Q5VZ72 239 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 PAPD7Q5XG87 772 aaKnown RBP5.32□□□□□ -1.56
USP47-211ENST00000531513 FAM180AQ6UWF9 173 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 GPR156Q8NFN8 814 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 NT5C1BQ96P26 610 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 C7orf25Q9BPX7 421 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 SPATA5L1Q9BVQ7 753 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 ARMT1Q9H993 441 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 STARD7Q9NQZ5 370 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 ZNF69Q9UC07 566 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 TLK1Q9UKI8 766 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 LZTS1Q9Y250 596 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 DGKBQ9Y6T7 804 aa5.32□□□□□ -1.56
USP47-211ENST00000531513 MAST3O60307 1309 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 RPTORQ8N122 1335 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 SALL3Q9BXA9 1300 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 hCG_1642624A0A1W2PR95 340 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 SGTAO43765 313 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms