RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 SPATA20Q8TB22 786 aa19.36■□□□□ 0.69
PTPN11-204ENST00000531326 GPT2Q8TD30 523 aa19.36■□□□□ 0.69
PTPN11-204ENST00000531326 ERCC4Q92889 916 aaPredicted RBP19.36■□□□□ 0.69
PTPN11-204ENST00000531326 HVCN1Q96D96 273 aa19.36■□□□□ 0.69
PTPN11-204ENST00000531326 ZFP14Q9HCL3 533 aa19.36■□□□□ 0.69
PTPN11-204ENST00000531326 EXOC1Q9NV70 894 aa19.36■□□□□ 0.69
PTPN11-204ENST00000531326 NCANO14594 1321 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 TTC26A0AVF1 554 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 M0QZQ0 153 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 CLDN3O15551 220 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 PRPF6O94906 941 aaKnown RBP19.35■□□□□ 0.69
PTPN11-204ENST00000531326 RHOBTB3O94955 611 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 VNN2O95498 520 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 TNFSF9P41273 254 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 RPS9P46781 194 aaKnown RBP19.35■□□□□ 0.69
PTPN11-204ENST00000531326 STK4Q13043 487 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 ALCAMQ13740 583 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 KCNB1Q14721 858 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 ZBTB6Q15916 424 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 L1TD1Q5T7N2 865 aaKnown RBP19.35■□□□□ 0.69
PTPN11-204ENST00000531326 ZNF852Q6ZMS4 543 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 ZNF687Q8N1G0 1237 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 KIAA0895Q8NCT3 520 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 BEST2Q8NFU1 509 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 DNASE1L2Q92874 299 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 NELL2Q99435 816 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 HINFPQ9BQA5 517 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 IKZF4Q9H2S9 585 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 SLC39A2Q9NP94 309 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 HOOK1Q9UJC3 728 aaKnown RBP19.35■□□□□ 0.69
PTPN11-204ENST00000531326 PCDHB13Q9Y5F0 798 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 PCDHA5Q9Y5H7 936 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 TIMM13Q9Y5L4 95 aaPredicted RBP19.35■□□□□ 0.69
PTPN11-204ENST00000531326 TICRRQ7Z2Z1 1910 aa19.35■□□□□ 0.69
PTPN11-204ENST00000531326 CPB1P15086 417 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 GJA1P17302 382 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 LRPAP1P30533 357 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 HOXD13P35453 343 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 EPHA5P54756 1037 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 PSMD2Q13200 908 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 CYP4A22Q5TCH4 519 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 SLC39A4Q6P5W5 647 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 TSSK4Q6SA08 328 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 VITQ6UXI7 678 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 ZBTB44Q8NCP5 570 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 NELL1Q92832 810 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 ZNF512Q96ME7 567 aaPredicted RBP19.34■□□□□ 0.69
PTPN11-204ENST00000531326 BRD9Q9H8M2 597 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 PLEKHA5Q9HAU0 1116 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 MAFFQ9ULX9 164 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 F5P12259 2224 aa19.34■□□□□ 0.69
PTPN11-204ENST00000531326 SPTLC1O15269 473 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 EIF3DO15371 548 aaKnown RBP eCLIP19.33■□□□□ 0.68
PTPN11-204ENST00000531326 FAM189A1O60320 539 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 OAZ2O95190 189 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 CLTAP09496 248 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 OR4Q2P0C623 313 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 MYL4P12829 197 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 VIPR2P41587 438 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 AARSP49588 968 aaKnown RBP eCLIP19.33■□□□□ 0.68
PTPN11-204ENST00000531326 GUCY2FP51841 1108 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 YWHAHQ04917 246 aaPredicted RBP19.33■□□□□ 0.68
PTPN11-204ENST00000531326 IQCEQ6IPM2 695 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 ELMOD1Q8N336 334 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 ZNF507Q8TCN5 953 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 SCFD1Q8WVM8 642 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 SMARCD2Q92925 531 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 KIF12Q96FN5 646 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 BICD1Q96G01 975 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 ACCSQ96QU6 501 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 TRMT61BQ9BVS5 477 aaKnown RBP19.33■□□□□ 0.68
PTPN11-204ENST00000531326 CRISPLD1Q9H336 500 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 PRMT8Q9NR22 394 aaPredicted RBP19.33■□□□□ 0.68
PTPN11-204ENST00000531326 YIPF1Q9Y548 306 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 PCDHGA2Q9Y5H1 932 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 CEP250Q9BV73 2442 aa19.33■□□□□ 0.68
PTPN11-204ENST00000531326 LACTBL1A8MY62 500 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 TISP43B9A030 160 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 ANKRD63C9JTQ0 380 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 HNRNPDLO14979 420 aaKnown RBP19.32■□□□□ 0.68
PTPN11-204ENST00000531326 NCAM2O15394 837 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 SMC2O95347 1197 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 MATR3P43243 847 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTPN11-204ENST00000531326 LIG4P49917 911 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 MTAPQ13126 283 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 BMT2Q1RMZ1 405 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 STXBP4Q6ZWJ1 553 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 SHKBP1Q8TBC3 707 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 SMARCE1Q969G3 411 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 CCDC47Q96A33 483 aaKnown RBP19.32■□□□□ 0.68
PTPN11-204ENST00000531326 PGLYRP2Q96PD5 576 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 GSDMAQ96QA5 445 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 LRRC3Q9BY71 257 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 CLSTN2Q9H4D0 955 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 ZNF334Q9HCZ1 680 aaPredicted RBP19.32■□□□□ 0.68
PTPN11-204ENST00000531326 ASAH2Q9NR71 780 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 ZSCAN32Q9NX65 697 aa19.32■□□□□ 0.68
PTPN11-204ENST00000531326 NDRG2Q9UN36 371 aaKnown RBP19.32■□□□□ 0.68
PTPN11-204ENST00000531326 MRPS17Q9Y2R5 130 aaKnown RBP19.32■□□□□ 0.68
PTPN11-204ENST00000531326 UBE4BO95155 1302 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms