RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 MREGQ8N565 214 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 LRRC57Q8N9N7 239 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 PPP1R13LQ8WUF5 828 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 ZNF606Q8WXB4 792 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 TRIM4Q9C037 500 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 SNX25Q9H3E2 840 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 C12orf65Q9H3J6 166 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 HOXC10Q9NYD6 342 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 R3HDM2Q9Y2K5 976 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 NUB1Q9Y5A7 615 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 NID2Q14112 1375 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 TRIM49D1C9J1S8 452 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 SPECC1L-ADORA2AF8WAN1 911 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 P4HA2O15460 535 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 ATP9BO43861 1147 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 EXTL3O43909 919 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 FSBPO95073 299 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 FMO1Q01740 532 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 RNASELQ05823 741 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 CLEC16AQ2KHT3 1053 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 TTC27Q6P3X3 843 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 ISLR2Q6UXK2 745 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 NLRP9Q7RTR0 991 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 RYBPQ8N488 228 aaPredicted RBP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 PRPF31Q8WWY3 499 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 PPWD1Q96BP3 646 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 KREMEN1Q96MU8 473 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 TSC22D3Q99576 134 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 VAV3Q9UKW4 847 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 NEMP1O14524 444 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 CRCPO75575 148 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 LCA5LO95447 670 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 CNGA2Q16280 664 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 MMEL1Q495T6 779 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 DALRD3Q5D0E6 543 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 RABGAP1LQ5R372 815 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 NDUFAF2Q8N183 169 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 CCNYL1Q8N7R7 359 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 GMCL1P1Q8NEA9 526 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 TRAPPC12Q8WVT3 735 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 DCLK3Q9C098 648 aa10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 KLHL8Q9P2G9 620 aaPredicted RBP10.41□□□□□ -0.74
CCDC90B-214ENST00000529689 GRIN2DO15399 1336 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 RBAK-RBAKDNI3L0D1 243 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 GPC4O75487 556 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 GSTA1P08263 222 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 GSTA2P09210 222 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 VIL1P09327 827 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 SNHG28P0DPA3 235 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 TYK2P29597 1187 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 CA8P35219 290 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 CLCN3P51790 818 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 SEPT6Q14141 434 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 RRP1BQ14684 758 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 GLRA4Q5JXX5 417 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 ANGEL2Q5VTE6 544 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 EXT2Q93063 718 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 GRAMD1AQ96CP6 724 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 KIF12Q96FN5 646 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 FHDC1Q9C0D6 1143 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 ARMCX1Q9P291 453 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 STRIP2Q9ULQ0 834 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 PEX10O60683 326 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 HSPA4LO95757 839 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 VCAM1P19320 739 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 ELF3P78545 371 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 ZNF200P98182 395 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 TAF1BQ53T94 588 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 ATG16L1Q676U5 607 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 RNF135Q8IUD6 432 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 CCDC97Q96F63 343 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 CEP41Q9BYV8 373 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 ANKEF1Q9NU02 776 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 DLGAP2Q9P1A6 1054 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 PIM2Q9P1W9 311 aa10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 APOBEC2Q9Y235 224 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-214ENST00000529689 SNX3O60493 162 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 PGK2P07205 417 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 COG7P83436 770 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 RPS6KA2Q15349 733 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 HEATR6Q6AI08 1181 aaKnown RBP10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 SH3BP5LQ7L8J4 393 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 PID1Q7Z2X4 250 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 RSPH3Q86UC2 560 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 CD302Q8IX05 232 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 CNPY4Q8N129 248 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 AGAP11Q8TF27 550 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 DCPSQ96C86 337 aaKnown RBP10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 PGM2Q96G03 612 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 CISHQ9NSE2 258 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 WRAP73Q9P2S5 460 aaPredicted RBP10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 TLK1Q9UKI8 766 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 SLC4A7Q9Y6M7 1214 aa10.4□□□□□ -0.75
CCDC90B-214ENST00000529689 CYP3A7-CYP3A51PA0A087WV96 503 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 A8MUI8 341 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 A8MXQ7 604 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms