RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 SEMA4GQ9NTN9 838 aa9.32□□□□□ -0.92
TGFBR3-208ENST00000529608 DDX19AQ9NUU7 478 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-208ENST00000529608 TFIP11Q9UBB9 837 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-208ENST00000529608 TUBGCP4Q9UGJ1 667 aa9.32□□□□□ -0.92
TGFBR3-208ENST00000529608 GMEB2Q9UKD1 530 aa9.32□□□□□ -0.92
TGFBR3-208ENST00000529608 MRPS17Q9Y2R5 130 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-208ENST00000529608 GREB1Q4ZG55 1949 aa9.32□□□□□ -0.92
TGFBR3-208ENST00000529608 SPTBN2O15020 2390 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 SLC38A8A6NNN8 435 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 HEPACAM2A8MVW5 462 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 E9PMD0 336 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 K7ERI5 159 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 MAN2B1O00754 1011 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 SYN3O14994 580 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 TRAPPC3O43617 180 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 MICAL2O94851 1124 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 KCNE1P15382 129 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 SDHBP21912 280 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 ELF1P32519 619 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 NPTX2P47972 431 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 PEX3P56589 373 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 SPAG1Q07617 926 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 ZNF568Q3ZCX4 644 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 CTXN3Q4LDR2 81 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 HS1BP3Q53T59 392 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 LAIR1Q6GTX8 287 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 PRR23CQ6ZRP0 262 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 MFSD6LQ8IWD5 586 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 SCUBE3Q8IX30 993 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 FBXO18Q8NFZ0 1043 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 TTC8Q8TAM2 541 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 WASF1Q92558 559 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 IRF7Q92985 503 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 SECISBP2LQ93073 1101 aaKnown RBP9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 ZFYVE19Q96K21 471 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 C8orf76Q96K31 380 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 SUSD3Q96L08 255 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 HAPLN2Q9GZV7 340 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 TRPV4Q9HBA0 871 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 BRMS1Q9HCU9 246 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 RXFP3Q9NSD7 469 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 CNTN3Q9P232 1028 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 RALYQ9UKM9 306 aaKnown RBP9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 TIMM13Q9Y5L4 95 aaPredicted RBP9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 OBSL1O75147 1896 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 MYH11P35749 1972 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 MAP1BP46821 2468 aaKnown RBP9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 DENND4CQ5VZ89 1909 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 PHLPP2Q6ZVD8 1323 aa9.31□□□□□ -0.92
TGFBR3-208ENST00000529608 MYO16Q9Y6X6 1858 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 A0A1W2PRU2 124 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 SFI1A8K8P3 1242 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 PP2D1A8MPX8 630 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 ZNF263O14978 683 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 RETP07949 1114 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 OR52Z1P0C646 297 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 HARSP12081 509 aaKnown RBP9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 CXCL12P48061 93 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 CCR3P51677 355 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 CDR1P51861 262 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 EFNA5P52803 228 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 SIM2Q14190 667 aaPredicted RBP9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 PPP2R5AQ15172 486 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 CCDC6Q16204 474 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 ST3GAL2Q16842 350 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 SLC10A6Q3KNW5 377 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 TPGS2Q68CL5 300 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 HEATR6Q6AI08 1181 aaKnown RBP9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 FAM173BQ6P4H8 233 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 PKN3Q6P5Z2 889 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 KCNK18Q7Z418 384 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 TTC9BQ8N6N2 239 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 CELF5Q8N6W0 485 aaKnown RBP9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 BEST2Q8NFU1 509 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 NETO1Q8TDF5 533 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 PGLYRP2Q96PD5 576 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 RUSC1Q9BVN2 902 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 CCDC94Q9BW85 323 aaPredicted RBP9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 GTSE1Q9NYZ3 720 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 ARHGAP28Q9P2N2 729 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 AFF4Q9UHB7 1163 aaKnown RBP9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 KIAA1024Q9UPX6 916 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 YIPF1Q9Y548 306 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 KIAA1549LQ6ZVL6 1849 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 USP24Q9UPU5 2620 aa9.3□□□□□ -0.92
TGFBR3-208ENST00000529608 F5P12259 2224 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 H7C4K7 107 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 ZNF197O14709 1029 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 PPEF2O14830 753 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 HIP1RO75146 1068 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 SOAT2O75908 522 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 CPB1P15086 417 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 CDC25AP30304 524 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 CCT6AP40227 531 aaKnown RBP9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 GUCY2FP51841 1108 aa9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 YARSP54577 528 aaKnown RBP9.29□□□□□ -0.92
TGFBR3-208ENST00000529608 NRLP54845 237 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms