RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 APBA1Q02410 837 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 TOB2Q14106 344 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-212ENST00000529046 DCAF17Q5H9S7 520 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-212ENST00000529046 C1QL3Q5VWW1 255 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 PPP4R3AQ6IN85 833 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 CATIPQ7Z7H3 387 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 TTC7BQ86TV6 843 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 MYO1HQ8N1T3 1032 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 REPS2Q8NFH8 660 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 DIS3LQ8TF46 1054 aaKnown RBP6.04□□□□□ -1.44
CSDE1-212ENST00000529046 MVB12AQ96EY5 273 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 CDC5LQ99459 802 aaKnown RBP6.04□□□□□ -1.44
CSDE1-212ENST00000529046 MNTQ99583 582 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 NMRK2Q9NPI5 230 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 PCDHA13Q9Y5I0 950 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 TRPM1Q7Z4N2 1603 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 XDHP47989 1333 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 TTC21BQ7Z4L5 1316 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 WDR17Q8IZU2 1322 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 TNS1Q9HBL0 1735 aaKnown RBP6.03□□□□□ -1.44
CSDE1-212ENST00000529046 DTNBO60941 627 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 OFD1O75665 1012 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 SLC25A3Q00325 362 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 TLE1Q04724 770 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 RAB39AQ14964 217 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 PGS1Q32NB8 556 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 DACT2Q5SW24 774 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 DRICH1Q6PGQ1 229 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-212ENST00000529046 SEM1Q6ZVN7 128 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 AMER2Q8N7J2 671 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 OR52N2Q8NGI0 321 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 TTC8Q8TAM2 541 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 MDM1Q8TC05 714 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 NEU4Q8WWR8 484 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-212ENST00000529046 C1GALT1C1Q96EU7 318 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 SLC2A4RGQ9NR83 387 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 MOCS1Q9NZB8 636 aa6.03□□□□□ -1.44
CSDE1-212ENST00000529046 AJAP1Q9UKB5 411 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-212ENST00000529046 ROCK2O75116 1388 aaKnown RBP6.03□□□□□ -1.44
CSDE1-212ENST00000529046 PARP4Q9UKK3 1724 aaKnown RBP6.02□□□□□ -1.45
CSDE1-212ENST00000529046 MYBBP1AQ9BQG0 1328 aaKnown RBP6.02□□□□□ -1.45
CSDE1-212ENST00000529046 OVOS2A0A0G2JMS6 1433 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 OVOS2A0A0J9YW53 1432 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 OVOS2Q6IE36 1432 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 H3BML4 177 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 ERC2O15083 957 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 TEX33O43247 280 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 FAM20BO75063 409 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 GPR32O75388 356 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 CT47B1P0C2W7 299 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-212ENST00000529046 HSPA6P17066 643 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 HK1P19367 917 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 FPR1P21462 350 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 IL12RB1P42701 662 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 CTXN1P60606 82 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 TGFB2P61812 414 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 ZNF267Q14586 743 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-212ENST00000529046 MLC1Q15049 377 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 BMT2Q1RMZ1 405 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 MINDY4Q4G0A6 757 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 RABL3Q5HYI8 236 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 PLXDC1Q8IUK5 500 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 RHOT1Q8IXI2 618 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 KAT5Q92993 513 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 CPPED1Q9BRF8 314 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-212ENST00000529046 CPEB1Q9BZB8 566 aaKnown RBP6.02□□□□□ -1.45
CSDE1-212ENST00000529046 TDP1Q9NUW8 608 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 TMEM140Q9NV12 185 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 SLC23A1Q9UHI7 598 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 CCDC7Q96M83 1385 aa6.02□□□□□ -1.45
CSDE1-212ENST00000529046 PNPLA7Q6ZV29 1317 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 QRICH2Q9H0J4 1663 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 RGPD3A6NKT7 1758 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-212ENST00000529046 COL18A1P39060 1754 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 RGPD4Q7Z3J3 1758 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 TBKBP1A7MCY6 615 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 CXorf49A8MYA2 514 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-212ENST00000529046 EXOC5O00471 708 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 SUV39H1O43463 412 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 MARCH6O60337 910 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 RPLP2P05387 115 aaKnown RBP6.01□□□□□ -1.45
CSDE1-212ENST00000529046 DDCP20711 480 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 ALDH1A3P47895 512 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 HK3P52790 923 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 GBX1Q14549 363 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 IFIT1BQ5T764 474 aaKnown RBP6.01□□□□□ -1.45
CSDE1-212ENST00000529046 AFMIDQ63HM1 303 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 TOM1L2Q6ZVM7 507 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 FAM83AQ86UY5 434 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 DCBLD1Q8N8Z6 715 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 SLC35B2Q8TB61 432 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 CLIP3Q96DZ5 547 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 SIN3AQ96ST3 1273 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 MAP3K14Q99558 947 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 SENP6Q9GZR1 1112 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-212ENST00000529046 NOB1Q9ULX3 412 aaKnown RBP6.01□□□□□ -1.45
CSDE1-212ENST00000529046 PEAK1Q9H792 1746 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 NINLQ9Y2I6 1382 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 RREB1Q92766 1687 aa6.01□□□□□ -1.45
CSDE1-212ENST00000529046 NT5C1B-RDH14C9J2C7 533 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms