RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 PRG3Q9Y2Y8 225 aaPredicted RBP12.59□□□□□ -0.39
TM9SF1-207ENST00000528895 SLC4A7Q9Y6M7 1214 aa12.59□□□□□ -0.39
TM9SF1-207ENST00000528895 EYSQ5T1H1 3165 aa12.59□□□□□ -0.39
TM9SF1-207ENST00000528895 TRIP11Q15643 1979 aa12.59□□□□□ -0.39
TM9SF1-207ENST00000528895 PRUNE2Q8WUY3 3088 aa12.58□□□□□ -0.39
TM9SF1-207ENST00000528895 COL4A6Q14031 1691 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 TET1Q8NFU7 2136 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 SPTLC1O15269 473 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 CCP110O43303 1012 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 MED7O43513 233 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 TADA2AO75478 443 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 ALDH2P05091 517 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 PAEPP09466 180 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 CYP11B1P15538 503 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 LAG3P18627 525 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 MSNP26038 577 aaKnown RBP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 EIF4A3P38919 411 aaKnown RBP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 LHX1P48742 406 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 KIF11P52732 1056 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 ZNF132P52740 706 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 NDST1P52848 882 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 CDH8P55286 799 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 BTG3Q14201 252 aaPredicted RBP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 BMS1Q14692 1282 aaKnown RBP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 SPA17Q15506 151 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 Q7L0L9 218 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 IRF2BP2Q7Z5L9 587 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 C3orf58Q8NDZ4 430 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 PHOSPHO2Q8TCD6 241 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 EPS8L1Q8TE68 723 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 HASPINQ8TF76 798 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 TNIP3Q96KP6 325 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 SENP8Q96LD8 212 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 PAAF1Q9BRP4 392 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 NT5C1AQ9BXI3 368 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 SDCBP2Q9H190 292 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 PDCL3Q9H2J4 239 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 AAASQ9NRG9 546 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 SEPT11Q9NVA2 429 aaKnown RBP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 CACNG4Q9UBN1 327 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 PUF60Q9UHX1 559 aaKnown RBP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 PCDHB8Q9UN66 801 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 L1RE1Q9UN81 338 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 FAN1Q9Y2M0 1017 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 SF3B1O75533 1304 aaKnown RBP eCLIP12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 CDH23Q9H251 3354 aa12.58□□□□□ -0.4
TM9SF1-207ENST00000528895 EIF3CLB5ME19 914 aaKnown RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 M0QZQ0 153 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 NRP1O14786 923 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 THAP12O43422 761 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 NDUFA10O95299 355 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 GJB5O95377 273 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 PLEKP08567 350 aaPredicted RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 CCDC175P0C221 793 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 CD19P15391 556 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 TYMPP19971 482 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 TNFAIP3P21580 790 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 CLCN1P35523 988 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 SLC11A1P49279 550 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 KRT83P78385 493 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 CDR2Q01850 454 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 SOWAHAQ2M3V2 549 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 ZNF394Q53GI3 561 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 PPP1R2P3Q6NXS1 205 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 TRIM72Q6ZMU5 477 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 C16orf59Q7L2K0 433 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 SLC47A2Q86VL8 602 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 PDCL2Q8N4E4 241 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 ZNF689Q96CS4 500 aaPredicted RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 TMEM176AQ96HP8 235 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 SUSD3Q96L08 255 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 ZNF558Q96NG5 402 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 EIF3CQ99613 913 aaKnown RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 CHP1Q99653 195 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 MRPL45Q9BRJ2 306 aaKnown RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 RC3H2Q9HBD1 1191 aaKnown RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 DNAJB4Q9UDY4 337 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 NOCTQ9UK39 431 aaKnown RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 ADAM28Q9UKQ2 775 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 KIAA1257Q9ULG3 409 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 STXBP5LQ9Y2K9 1186 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 FNDC1Q4ZHG4 1894 aaPredicted RBP12.57□□□□□ -0.4
TM9SF1-207ENST00000528895 TSC2P49815 1807 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 A8MXQ7 604 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 SYN3O14994 580 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 ZSCAN12O43309 604 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 B4GALT3O60512 393 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 CYP11A1P05108 521 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 VDRP11473 427 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 ATP2A2P16615 1042 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 PCSK1P29120 753 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 PPM1AP35813 382 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 BRCC3P46736 316 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms