RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 PIGHQ14442 188 aaPredicted RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 TMEM132BQ14DG7 1078 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 P3H1Q32P28 736 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 ATP13A4Q4VNC1 1196 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 FAM133BQ5BKY9 247 aaKnown RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 ZBTB41Q5SVQ8 909 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 RNASEH2BQ5TBB1 312 aaKnown RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 DCAF15Q66K64 600 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 ZNF772Q68DY9 489 aaPredicted RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 MFSD7Q6UXD7 560 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 CATSPERGQ6ZRH7 1159 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 TRMT1LQ7Z2T5 733 aaKnown RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 PCGF5Q86SE9 256 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 TBC1D1Q86TI0 1168 aaPredicted RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 WDR49Q8IV35 697 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 WDTC1Q8N5D0 677 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 FITM2Q8N6M3 262 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 ANKRD42Q8N9B4 389 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 ANKLE1Q8NAG6 615 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 DEPTORQ8TB45 409 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 TMEM143Q96AN5 459 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 C9orf72Q96LT7 481 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 CAMKK2Q96RR4 588 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 TGS1Q96RS0 853 aaKnown RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 MSTO1Q9BUK6 570 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 TARS2Q9BW92 718 aaKnown RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 ACAD9Q9H845 621 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 EBF2Q9HAK2 575 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 PCDH9Q9HC56 1237 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 SAYSD1Q9NPB0 183 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 NRBP2Q9NSY0 501 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 DNAJC17Q9NVM6 304 aaKnown RBP8.85□□□□□ -0.99
CSTF3-208ENST00000528865 KLHL14Q9P2G3 628 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 DNPEPQ9ULA0 475 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 SHOC2Q9UQ13 582 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 USTQ9Y2C2 406 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 CD2APQ9Y5K6 639 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 SNCAIPQ9Y6H5 919 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 RLFQ13129 1914 aa8.85□□□□□ -0.99
CSTF3-208ENST00000528865 ARID2Q68CP9 1835 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 GSTTP1A0A1W2PQM5 241 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 C3orf70A6NLC5 250 aaPredicted RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 FOXO6A8MYZ6 492 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 RASA4BC9J798 803 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 E7ESA3 106 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 SMAPO00193 183 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 RASA4O43374 803 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 CST3P01034 146 aaPredicted RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 GH1P01241 217 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 KRT1P04264 644 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 EDN1P05305 212 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 KRT10P13645 584 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 EZRP15311 586 aaKnown RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 EIF4BP23588 611 aaKnown RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 CCND1P24385 295 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 CDKN2BP42772 138 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 VPS41P49754 854 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 ALDH5A1P51649 535 aaPredicted RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 RPL7AP62424 266 aaKnown RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 KCNJ2P63252 427 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 MGAT5Q09328 741 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 MOGSQ13724 837 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 SPARCL1Q14515 664 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 STXBP2Q15833 593 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 SGSM1Q2NKQ1 1148 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 PARP6Q2NL67 630 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 FER1L6Q2WGJ9 1857 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 C2CD6Q53TS8 623 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 EFHC2Q5JST6 749 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 DAB2IPQ5VWQ8 1189 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 SNRNP48Q6IEG0 339 aaKnown RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 POLNQ7Z5Q5 900 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 PRUNE1Q86TP1 453 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 ECHDC2Q86YB7 292 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 PASD1Q8IV76 773 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 SRRM1Q8IYB3 904 aaKnown RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 GLIS1Q8NBF1 620 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 TMEM35BQ8NCS4 154 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 CHST13Q8NET6 341 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 DNERQ8NFT8 737 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 FNIP1Q8TF40 1166 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 FAXDC2Q96IV6 333 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 PCYT2Q99447 389 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 DHRS4Q9BTZ2 278 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 TEX13BQ9BXU2 312 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 LHX5Q9H2C1 402 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 TRABDQ9H4I3 376 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 CYLDQ9NQC7 956 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 FARP1Q9Y4F1 1045 aaPredicted RBP8.84□□□□□ -0.99
CSTF3-208ENST00000528865 IVNS1ABPQ9Y6Y0 642 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 SIP14410 1827 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 PARP14Q460N5 1801 aa8.84□□□□□ -0.99
CSTF3-208ENST00000528865 EXOC1LA0A1B0GW35 172 aa8.83□□□□□ -1
CSTF3-208ENST00000528865 SIGLEC16A6NMB1 481 aa8.83□□□□□ -1
CSTF3-208ENST00000528865 F8VP50 259 aa8.83□□□□□ -1
CSTF3-208ENST00000528865 IGF2BP3O00425 579 aaKnown RBP eCLIP8.83□□□□□ -1
CSTF3-208ENST00000528865 ABLIM1O14639 778 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms