RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 LUC7L2Q9Y383 392 aaKnown RBP8.47□□□□□ -1.05
SSBP3-211ENST00000528787 PTPRJQ12913 1337 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 GABRDO14764 452 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 MEFVO15553 781 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 VNN1O95497 513 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 KRT5P13647 590 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 FERP16591 822 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 CA8P35219 290 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 ASPAP45381 313 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 TUFMP49411 452 aaKnown RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 AFF1P51825 1210 aaKnown RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 GSDMDP57764 484 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 RAPGEF1Q13905 1077 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 PSMD5Q16401 504 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 CTXN3Q4LDR2 81 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 VARS2Q5ST30 1063 aaKnown RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 KLHDC7AQ5VTJ3 777 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 CCDC149Q6ZUS6 474 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 RNF168Q8IYW5 571 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 TXLNBQ8N3L3 684 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 PDCL2Q8N4E4 241 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 CXorf38Q8TB03 319 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 SPPL3Q8TCT6 385 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 SPPL2BQ8TCT7 592 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 POF1BQ8WVV4 589 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 ARNTL2Q8WYA1 636 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 RIN2Q8WYP3 895 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 SYN2Q92777 582 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 MRPL38Q96DV4 380 aaKnown RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 NOX5Q96PH1 765 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 TCF25Q9BQ70 676 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 CRACR2AQ9BSW2 395 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 LSM14BQ9BX40 385 aaKnown RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 XPO4Q9C0E2 1151 aaKnown RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 ZBP1Q9H171 429 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 LUC7LQ9NQ29 371 aaKnown RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 CISHQ9NSE2 258 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 FAM207AQ9NSI2 230 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 TMEM51Q9NW97 253 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 MARCH5Q9NX47 278 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 DDX43Q9NXZ2 648 aaKnown RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 MTRRQ9UBK8 725 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 HESX1Q9UBX0 185 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 DNAJC12Q9UKB3 198 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 STXBP5LQ9Y2K9 1186 aa8.46□□□□□ -1.06
SSBP3-211ENST00000528787 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-211ENST00000528787 MYH10P35580 1976 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 GRXCR1A8MXD5 290 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 TRIM66O15016 1216 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 IPO7O95373 1038 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 CXCL14O95715 111 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 FGF19O95750 216 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 ITGB1P05556 798 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 VDRP11473 427 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 CPB1P15086 417 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 POU3F3P20264 500 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 PDE6CP51160 858 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 POLR2FP61218 127 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 RPL10AP62906 217 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 ZBED6P86452 979 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 MRPL58Q14197 206 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 SOWAHAQ2M3V2 549 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 INTS6LQ5JSJ4 861 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 LIN9Q5TKA1 542 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 SLC8B1Q6J4K2 584 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 VSTM1Q6UX27 236 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 CYP26C1Q6V0L0 522 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 TRIM72Q6ZMU5 477 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 APTXQ7Z2E3 356 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 LIMS2Q7Z4I7 341 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 TMCO2Q7Z6W1 182 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 SPATA2LQ8IUW3 424 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 VSTM4Q8IW00 320 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 CRYBG2Q8N1P7 616 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 ELMOD1Q8N336 334 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 MRPL43Q8N983 215 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 ZNF461Q8TAF7 563 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 LMO3Q8TAP4 145 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 HASPINQ8TF76 798 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 TMEM176AQ96HP8 235 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 C17orf80Q9BSJ5 609 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 TRIM62Q9BVG3 475 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 GPR62Q9BZJ7 368 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 ELOVL4Q9GZR5 314 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 PDCL3Q9H2J4 239 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 PLEKHA4Q9H4M7 779 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 NSUN3Q9H649 340 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 RXFP1Q9HBX9 757 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 DZANK1Q9NVP4 752 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 CNTN6Q9UQ52 1028 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 SIK3Q9Y2K2 1263 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 YBX2Q9Y2T7 364 aaKnown RBP8.45□□□□□ -1.06
SSBP3-211ENST00000528787 PCDHB5Q9Y5E4 795 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 PCDHB4Q9Y5E5 795 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 MYO9BQ13459 2157 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 PLXNA4Q9HCM2 1894 aa8.45□□□□□ -1.06
SSBP3-211ENST00000528787 MTCL1Q9Y4B5 1905 aaKnown RBP8.44□□□□□ -1.06
SSBP3-211ENST00000528787 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-211ENST00000528787 LCHNA4D1U4 455 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SPDYE4A6NLX3 237 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms