RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 HPDLQ96IR7 371 aa15.38■□□□□ 0.05
CAPN1-216ENST00000528739 MMS19Q96T76 1030 aa15.38■□□□□ 0.05
CAPN1-216ENST00000528739 ASAH2Q9NR71 780 aa15.38■□□□□ 0.05
CAPN1-216ENST00000528739 MAPK8IP1Q9UQF2 711 aa15.38■□□□□ 0.05
CAPN1-216ENST00000528739 NUMBLQ9Y6R0 609 aa15.38■□□□□ 0.05
CAPN1-216ENST00000528739 MTMR11A4FU01 709 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 CALUO43852 315 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-216ENST00000528739 PRPF40AO75400 957 aaKnown RBP15.37■□□□□ 0.05
CAPN1-216ENST00000528739 SOAT2O75908 522 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 PAPLNO95428 1278 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 PDGFBP01127 241 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-216ENST00000528739 POU2F2P09086 479 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 MYL7Q01449 175 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 CYP24A1Q07973 514 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 TRPC3Q13507 836 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 BMT2Q1RMZ1 405 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 CEP135Q66GS9 1140 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 PARM1Q6UWI2 310 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 MTSS1LQ765P7 747 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 BMP8AQ7Z5Y6 402 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 KIAA0895Q8NCT3 520 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 ASIC4Q96FT7 647 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 ZCWPW1Q9H0M4 648 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 SLITRK6Q9H5Y7 841 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 ABI2Q9NYB9 513 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-216ENST00000528739 DUSP12Q9UNI6 340 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 NCOR1O75376 2440 aa15.37■□□□□ 0.05
CAPN1-216ENST00000528739 FAM237AA0A1B0GTK4 181 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 CEBPBP17676 345 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 ACAT1P24752 427 aaKnown RBP15.36■□□□□ 0.05
CAPN1-216ENST00000528739 TUFMP49411 452 aaKnown RBP15.36■□□□□ 0.05
CAPN1-216ENST00000528739 BIRC3Q13489 604 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 PSMD6Q15008 389 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 SLC5A9Q2M3M2 681 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 SCARA3Q6AZY7 606 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 CENPPQ6IPU0 288 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 TRAPPC11Q7Z392 1133 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 NPAS3Q8IXF0 933 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 PDCL2Q8N4E4 241 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 TCEAL4Q96EI5 215 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 BORCS6Q96GS4 357 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 CGRRF1Q99675 332 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 KXD1Q9BQD3 176 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 DDX43Q9NXZ2 648 aaKnown RBP15.36■□□□□ 0.05
CAPN1-216ENST00000528739 CEP72Q9P209 647 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 SIX4Q9UIU6 781 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 CA14Q9ULX7 337 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 L1RE1Q9UN81 338 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 FRMD4BQ9Y2L6 1034 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 C2orf16Q68DN1 1984 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 PTPRJQ12913 1337 aa15.36■□□□□ 0.05
CAPN1-216ENST00000528739 PDCD11Q14690 1871 aaKnown RBP15.35■□□□□ 0.05
CAPN1-216ENST00000528739 MTCL1Q9Y4B5 1905 aaKnown RBP15.35■□□□□ 0.05
CAPN1-216ENST00000528739 NR3C1P04150 777 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 GJA1P17302 382 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 SMARCB1Q12824 385 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 DPYDQ12882 1025 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 HTR4Q13639 388 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 VEPH1Q14D04 833 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 ITIH5Q86UX2 942 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 ADGRF2Q8IZF7 708 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 SIX5Q8N196 739 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 TMEM86AQ8N2M4 240 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 TTC9BQ8N6N2 239 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 GIPC2Q8TF65 315 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 FGF14Q92915 247 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 FAM122AQ96E09 287 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 RPP25Q9BUL9 199 aaKnown RBP15.35■□□□□ 0.05
CAPN1-216ENST00000528739 CRISPLD1Q9H336 500 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 HOOK1Q9UJC3 728 aaKnown RBP15.35■□□□□ 0.05
CAPN1-216ENST00000528739 PCDHB5Q9Y5E4 795 aa15.35■□□□□ 0.05
CAPN1-216ENST00000528739 ANHXE9PGG2 379 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 PDXKO00764 312 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 RHOBTB3O94955 611 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 CST3P01034 146 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-216ENST00000528739 SRFP11831 508 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 LHX1P48742 406 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 CASP4P49662 377 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 TNNC1P63316 161 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 PNOCQ13519 176 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 DNAJB7Q7Z6W7 309 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-216ENST00000528739 LRRTM3Q86VH5 581 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 C12orf56Q8IXR9 622 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 TOP6BLQ8N6T0 577 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 LEMD2Q8NC56 503 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 SPPL2BQ8TCT7 592 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 C2orf15Q8WU43 125 aaKnown RBP15.34■□□□□ 0.05
CAPN1-216ENST00000528739 LPIN3Q9BQK8 851 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 RTP3Q9BQQ7 232 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 PI4K2AQ9BTU6 479 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 SNX25Q9H3E2 840 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 ATXN3LQ9H3M9 355 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 GDAP2Q9NXN4 497 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 GDE1Q9NZC3 331 aa15.34■□□□□ 0.05
CAPN1-216ENST00000528739 A0A1W2PRU2 124 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 VNN2O95498 520 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 PDGFRBP09619 1106 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 PCSK1P29120 753 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 AVPR2P30518 371 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 VCPP55072 806 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms