RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 TCP1P17987 556 aaKnown RBP8.21□□□□□ -1.1
SOX6-211ENST00000528429 HOXD10P28358 340 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 CA8P35219 290 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 GRM5P41594 1212 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 CDH8P55286 799 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 RPS6KA1Q15418 735 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 CC2D1AQ6P1N0 951 aaPredicted RBP8.21□□□□□ -1.1
SOX6-211ENST00000528429 TAF2Q6P1X5 1199 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 NOA1Q8NC60 698 aaKnown RBP8.21□□□□□ -1.1
SOX6-211ENST00000528429 C17orf50Q8WW18 174 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 CYFIP2Q96F07 1278 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 MS4A14Q96JA4 679 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 ISCUQ9H1K1 167 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 UTP6Q9NYH9 597 aaKnown RBP8.21□□□□□ -1.1
SOX6-211ENST00000528429 PARP2Q9UGN5 583 aa8.21□□□□□ -1.1
SOX6-211ENST00000528429 A0A0A6YYK5 440 aaPredicted RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 KCNK3O14649 394 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 ADAMTS4O75173 837 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 RECQL4O94761 1208 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 HMGCRP04035 888 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 GZMAP12544 262 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 MAP2K2P36507 400 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 CRYBB1P53674 252 aaPredicted RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 GPC5P78333 572 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 CKAP4Q07065 602 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 KYAT1Q16773 422 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 LONRF1Q17RB8 773 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 MEI1Q5TIA1 1274 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 TWF2Q6IBS0 349 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 LRRC57Q8N9N7 239 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 ZNF784Q8NCA9 323 aaPredicted RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 WNT8BQ93098 351 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 CELF4Q9BZC1 486 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 SMYD3Q9H7B4 428 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 DPP3Q9NY33 737 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 TSKSQ9UJT2 592 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 COG5Q9UP83 839 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 NOD1Q9Y239 953 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 CDY2AQ9Y6F7 541 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 NCANO14594 1321 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 YY1P25490 414 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 ASPAP45381 313 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 NSFP46459 744 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 MRPS6P82932 125 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 ADCY2Q08462 1091 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 C2orf54Q08AI8 447 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 MESDQ14696 234 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 CLEC16AQ2KHT3 1053 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 AP1ARQ63HQ0 302 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 RSRC2Q7L4I2 434 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 DPH6Q7L8W6 267 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 RSPH3Q86UC2 560 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 SESTD1Q86VW0 696 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 CREG2Q8IUH2 290 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 REM2Q8IYK8 340 aaPredicted RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 HPDLQ96IR7 371 aa8.2□□□□□ -1.1
SOX6-211ENST00000528429 ZMAT2Q96NC0 199 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 UPF3AQ9H1J1 476 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 NOC2LQ9Y3T9 749 aaKnown RBP8.2□□□□□ -1.1
SOX6-211ENST00000528429 MYCLP1P12525 358 aaPredicted RBP8.19□□□□□ -1.1
SOX6-211ENST00000528429 RRM1P23921 792 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 PAFAH1B1P43034 410 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 ACAD10Q6JQN1 1059 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 LLGL2Q6P1M3 1020 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 FBXO38Q6PIJ6 1188 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 FAM228AQ86W67 206 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 RHOT2Q8IXI1 618 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 SYCE1Q8N0S2 351 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 ZNF606Q8WXB4 792 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 C18orf25Q96B23 403 aaPredicted RBP8.19□□□□□ -1.1
SOX6-211ENST00000528429 TRIM11Q96F44 468 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 BTBD6Q96KE9 485 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 C11orf70Q9BRQ4 267 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 NUP85Q9BW27 656 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 RNF39Q9H2S5 420 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 TMEM165Q9HC07 324 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 CNOT8Q9UFF9 292 aaKnown RBP8.19□□□□□ -1.1
SOX6-211ENST00000528429 TUBGCP4Q9UGJ1 667 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 ARIH1Q9Y4X5 557 aaPredicted RBP8.19□□□□□ -1.1
SOX6-211ENST00000528429 MGAMO43451 1857 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 PPEF2O14830 753 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 RPS6KA5O75582 802 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 HOXC8P31273 242 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 THPOP40225 353 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 HNRNPH2P55795 449 aaKnown RBP8.19□□□□□ -1.1
SOX6-211ENST00000528429 PTGISQ16647 500 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 ZNF677Q86XU0 584 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 ZNF564Q8TBZ8 553 aaPredicted RBP8.19□□□□□ -1.1
SOX6-211ENST00000528429 RABGGTAQ92696 567 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 SNX27Q96L92 541 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 HINFPQ9BQA5 517 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 MUC3BQ9H195 1237 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 HMGXB4Q9UGU5 601 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 DDX20Q9UHI6 824 aaKnown RBP8.19□□□□□ -1.1
SOX6-211ENST00000528429 AMFRQ9UKV5 643 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 C2CD2Q9Y426 696 aa8.19□□□□□ -1.1
SOX6-211ENST00000528429 CEP104O60308 925 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 INHAP05111 366 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 TNNC1P63316 161 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 MRPS25P82663 173 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms