RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 ZNF131P52739 623 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 C9orf57Q5W0N0 161 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 PRR23BQ6ZRT6 265 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 Q6ZS52 159 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 MYCT1Q8N699 235 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 OR10T2Q8NGX3 314 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 TTC8Q8TAM2 541 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 GTSE1Q9NYZ3 720 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 HSFX1Q9UBD0 423 aa25.56■■□□□ 1.68
CPSF1-202ENST00000527827 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.56■■□□□ 1.68
CPSF1-202ENST00000527827 PIRO00625 290 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 NFICP08651 508 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 CTHP32929 405 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 SRSF5Q13243 272 aaKnown RBP25.55■■□□□ 1.68
CPSF1-202ENST00000527827 ARHGAP29Q52LW3 1261 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 GPR158Q5T848 1215 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 ARMCX5Q6P1M9 558 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 RALGPS2Q86X27 583 aaPredicted RBP25.55■■□□□ 1.68
CPSF1-202ENST00000527827 CD302Q8IX05 232 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 FAM212AQ96EL1 285 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 CNTNAP3BQ96NU0 1288 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 FIZ1Q96SL8 496 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 LPIN3Q9BQK8 851 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 MSTO1Q9BUK6 570 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 CNTNAP3Q9BZ76 1288 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 BLOC1S4Q9NUP1 217 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 C2orf42Q9NWW7 574 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 OBP2AQ9NY56 170 aa25.55■■□□□ 1.68
CPSF1-202ENST00000527827 CACNA1BQ00975 2339 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 ANO9A1A5B4 782 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 SLC26A4O43511 780 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 PRAMEF12O95522 483 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 FGF19O95750 216 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 CYP11A1P05108 521 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 SCP2P22307 547 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 PAX3P23760 479 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 SIM2Q14190 667 aaPredicted RBP25.54■■□□□ 1.68
CPSF1-202ENST00000527827 DHX8Q14562 1220 aaKnown RBP25.54■■□□□ 1.68
CPSF1-202ENST00000527827 DGKKQ5KSL6 1271 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 ITIH5Q86UX2 942 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 AK8Q96MA6 479 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 PARVGQ9HBI0 331 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 EPG5Q9HCE0 2579 aa25.54■■□□□ 1.68
CPSF1-202ENST00000527827 TCHHQ07283 1943 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 DENND4CQ5VZ89 1909 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 DPYSL4O14531 572 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 TRAK2O60296 914 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 FAM13AO94988 1023 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 WEE1P30291 646 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 CDR1P51861 262 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 TMEM132DQ14C87 1099 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 ARHGAP15Q53QZ3 475 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 LONP2Q86WA8 852 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 IL21Q9HBE4 155 aa25.53■■□□□ 1.68
CPSF1-202ENST00000527827 ACACBO00763 2458 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 LRP3O75074 770 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 ATF6P18850 670 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 HOXC13P31276 330 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 CYP4F8P98187 520 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 PON2Q15165 354 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 SLC39A12Q504Y0 691 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 CALML4Q96GE6 196 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 SEPT5Q99719 369 aaPredicted RBP25.52■■□□□ 1.68
CPSF1-202ENST00000527827 ZCWPW1Q9H0M4 648 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 TASP1Q9H6P5 420 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 DERAQ9Y315 318 aa25.52■■□□□ 1.68
CPSF1-202ENST00000527827 ANKRD63C9JTQ0 380 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 NMT1P30419 496 aaKnown RBP25.51■■□□□ 1.67
CPSF1-202ENST00000527827 CNR2P34972 360 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 TUFMP49411 452 aaKnown RBP25.51■■□□□ 1.67
CPSF1-202ENST00000527827 GTF2BQ00403 316 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 TNK2Q07912 1038 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 CCINQ13939 588 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 MCM6Q14566 821 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 HEATR6Q6AI08 1181 aaKnown RBP25.51■■□□□ 1.67
CPSF1-202ENST00000527827 FAM200AQ8TCP9 573 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 BPIFB1Q8TDL5 484 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 SEMA4GQ9NTN9 838 aa25.51■■□□□ 1.67
CPSF1-202ENST00000527827 TISP43B9A030 160 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 GJB2P29033 226 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 UBA7P41226 1012 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 ACOT2P49753 483 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 MGAT5BQ3V5L5 792 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 C8orf34Q49A92 452 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 NETO1Q8TDF5 533 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 RAD54LQ92698 747 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 SMG9Q9H0W8 520 aaKnown RBP25.5■■□□□ 1.67
CPSF1-202ENST00000527827 ASB7Q9H672 318 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 DSEQ9UL01 958 aa25.5■■□□□ 1.67
CPSF1-202ENST00000527827 H3BQV1 296 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 SLC30A4O14863 429 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 PLCG1P19174 1290 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 CDC25CP30307 473 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 HOXA6P31267 233 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 PLCB2Q00722 1185 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 GRIN1Q05586 938 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 VEPH1Q14D04 833 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 RABEP1Q15276 862 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 CSRP2Q16527 193 aa25.49■■□□□ 1.67
CPSF1-202ENST00000527827 ZC2HC1CQ53FD0 456 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms