RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PNPLA4P41247 253 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 SNW1Q13573 536 aaKnown RBP20.78■□□□□ 0.92
CAPN1-211ENST00000527739 PRSS36Q5K4E3 855 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 TANGO2Q6ICL3 276 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 UNC13DQ70J99 1090 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 CCDC105Q8IYK2 499 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 GRAMD1CQ8IYS0 662 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 C1orf127Q8N9H9 656 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 RDH13Q8NBN7 331 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 SERTAD1Q9UHV2 236 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 KIAA0391O15091 583 aaKnown RBP20.77■□□□□ 0.92
CAPN1-211ENST00000527739 ECI2O75521 394 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 RBP5P82980 135 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 MGAT5BQ3V5L5 792 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 FAM78AQ5JUQ0 283 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 CBWD2Q8IUF1 395 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 TTC9BQ8N6N2 239 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 LEMD2Q8NC56 503 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 SHDQ96IW2 340 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 ANKRD36BP1Q96IX9 119 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 SPATA32Q96LK8 384 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 PLA2G2FQ9BZM2 168 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 ZCWPW1Q9H0M4 648 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 ZFP14Q9HCL3 533 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 SLC39A2Q9NP94 309 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 HSPBP1Q9NZL4 362 aa20.77■□□□□ 0.92
CAPN1-211ENST00000527739 DOCK6Q96HP0 2047 aa20.77■□□□□ 0.91
CAPN1-211ENST00000527739 CLIC2O15247 247 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 EIF3DO15371 548 aaKnown RBP eCLIP20.76■□□□□ 0.91
CAPN1-211ENST00000527739 HUS1O60921 280 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 MICAL2O94851 1124 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 HOXD13P35453 343 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 CYP2J2P51589 502 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 PFKPQ01813 784 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 CUL4BQ13620 913 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 ANGPT1Q15389 498 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 TEAD2Q15562 447 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 SLC44A4Q53GD3 710 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 CNNM4Q6P4Q7 775 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 POTEHQ6S545 545 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 DCP1BQ8IZD4 617 aaKnown RBP20.76■□□□□ 0.91
CAPN1-211ENST00000527739 DTWD2Q8NBA8 298 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 ZNF507Q8TCN5 953 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 BORCS6Q96GS4 357 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 CHAMP1Q96JM3 812 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 ZSWIM3Q96MP5 696 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 MTMR12Q9C0I1 747 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 ITGA11Q9UKX5 1188 aa20.76■□□□□ 0.91
CAPN1-211ENST00000527739 PTPRZ1P23471 2315 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-211ENST00000527739 NRG2O14511 850 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-211ENST00000527739 TNNC2P02585 160 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 DCNP07585 359 aaKnown RBP20.75■□□□□ 0.91
CAPN1-211ENST00000527739 TUFMP49411 452 aaKnown RBP20.75■□□□□ 0.91
CAPN1-211ENST00000527739 GRM2Q14416 872 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 SURF1Q15526 300 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 TAF12Q16514 161 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 SCARA3Q6AZY7 606 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 EPM2AIP1Q7L775 607 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-211ENST00000527739 NKD2Q969F2 451 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-211ENST00000527739 ELSPBP1Q96BH3 223 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 DNAJC25Q9H1X3 360 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 KIAA1586Q9HCI6 787 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 AGPAT3Q9NRZ7 376 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 ABI2Q9NYB9 513 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-211ENST00000527739 SIT1Q9Y3P8 196 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
CAPN1-211ENST00000527739 SPTBN4Q9H254 2564 aa20.75■□□□□ 0.91
CAPN1-211ENST00000527739 DOCK8Q8NF50 2099 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 A0A1B0GVL5 298 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 PVALEFA0A1B0GWK0 134 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 A0A1W2PRU2 124 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 MOSPD3O75425 235 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 KRT85P78386 507 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 TSPY1Q01534 308 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 VEPH1Q14D04 833 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 MLF2Q15773 248 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-211ENST00000527739 DUOXA2Q1HG44 320 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 RIF1Q5UIP0 2472 aaKnown RBP20.74■□□□□ 0.91
CAPN1-211ENST00000527739 PHLDB3Q6NSJ2 640 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 HS2ST1Q7LGA3 356 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 DNAJB7Q7Z6W7 309 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-211ENST00000527739 ITIH5Q86UX2 942 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 LRRTM3Q86VH5 581 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 GPIHBP1Q8IV16 184 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 PDCL2Q8N4E4 241 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 LRRC52Q8N7C0 313 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 SHKBP1Q8TBC3 707 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 ZSCAN18Q8TBC5 510 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-211ENST00000527739 SMARCD2Q92925 531 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 ASB16Q96NS5 453 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 FOXQ1Q9C009 403 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 ASB3Q9Y575 518 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 SNX9Q9Y5X1 595 aa20.74■□□□□ 0.91
CAPN1-211ENST00000527739 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 DLATP10515 647 aaKnown RBP20.73■□□□□ 0.91
CAPN1-211ENST00000527739 VIPR2P41587 438 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 EPHA5P54756 1037 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 MYO1EQ12965 1108 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 ADSSL1Q8N142 457 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 OR5B17Q8NGF7 314 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms