RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CEP290O15078 2479 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 CASTOR2A6NHX0 329 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 LRPAP1P30533 357 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 USP8P40818 1118 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 CLCNKBP51801 687 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 PPIGQ13427 754 aaKnown RBP eCLIP20.05■□□□□ 0.8
SMPD1-203ENST00000527275 CUL2Q13617 745 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 ZNF667Q5HYK9 610 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 NPAS4Q8IUM7 802 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 AGPAT1Q99943 283 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 NIF3L1Q9GZT8 377 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 VRTNQ9H8Y1 702 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 TBC1D13Q9NVG8 400 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 INTUQ9ULD6 942 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 SNX12Q9UMY4 172 aa20.05■□□□□ 0.8
SMPD1-203ENST00000527275 LTBP2Q14767 1821 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 PRLRP16471 622 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 IGFBP6P24592 240 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-203ENST00000527275 EPHB4P54760 987 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 TUBB4BP68371 445 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 MYO1EQ12965 1108 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 TMCO2Q7Z6W1 182 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-203ENST00000527275 ZNF280BQ86YH2 543 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 TNS4Q8IZW8 715 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 GPR161Q8N6U8 529 aaKnown RBP20.04■□□□□ 0.8
SMPD1-203ENST00000527275 LRRC52Q8N7C0 313 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 CASD1Q96PB1 797 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 POLIQ9UNA4 740 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 MYH10P35580 1976 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 ATP8B3O60423 1300 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 B4GALT3O60512 393 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 PALMO75781 387 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 ASPAP45381 313 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 WDR5P61964 334 aaKnown RBP20.04■□□□□ 0.8
SMPD1-203ENST00000527275 DEFB103AP81534 67 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 TUSC3Q13454 348 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 ZNF365Q70YC5 407 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 FAM71AQ8IYT1 594 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 URGCPQ8TCY9 931 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 TOP1MTQ969P6 601 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 KANSL3Q9P2N6 904 aa20.04■□□□□ 0.8
SMPD1-203ENST00000527275 DDHD2O94830 711 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 STAU1O95793 577 aaKnown RBP20.03■□□□□ 0.8
SMPD1-203ENST00000527275 TBXAS1P24557 533 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-203ENST00000527275 UPP1Q16831 310 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 FBXO38Q6PIJ6 1188 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 SCARA5Q6ZMJ2 495 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 ENOSF1Q7L5Y1 443 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 SHC3Q92529 594 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 CAPZA3Q96KX2 299 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 EPC1Q9H2F5 836 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 SEPT11Q9NVA2 429 aaKnown RBP20.03■□□□□ 0.8
SMPD1-203ENST00000527275 RNF216Q9NWF9 866 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-203ENST00000527275 PCDHGC5Q9Y5F6 944 aa20.03■□□□□ 0.8
SMPD1-203ENST00000527275 SPTLC1O15269 473 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 HOXA2O43364 376 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 EFCAB14O75071 495 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 BAIAP3O94812 1187 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 WEE2P0C1S8 567 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 GALCP54803 685 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 LILRA4P59901 499 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 RNASELQ05823 741 aaKnown RBP20.02■□□□□ 0.8
SMPD1-203ENST00000527275 FAM81BQ96LP2 452 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 SNX9Q9Y5X1 595 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 LAMA3Q16787 3333 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 TMCO5BA8MYB1 307 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 ZNF185O15231 689 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 FGBP02675 491 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 RPL9P32969 192 aaKnown RBP20.02■□□□□ 0.8
SMPD1-203ENST00000527275 NOP2P46087 812 aaKnown RBP20.02■□□□□ 0.8
SMPD1-203ENST00000527275 DSC1Q08554 894 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 IFI16Q16666 785 aaKnown RBP20.02■□□□□ 0.8
SMPD1-203ENST00000527275 C3orf58Q8NDZ4 430 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 SLC20A1Q8WUM9 679 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 MMS19Q96T76 1030 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 TLR10Q9BXR5 811 aa20.02■□□□□ 0.8
SMPD1-203ENST00000527275 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.02■□□□□ 0.8
SMPD1-203ENST00000527275 KPNA7A9QM74 516 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 PODXLO00592 558 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 NCK2O43639 380 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 RRP9O43818 475 aaKnown RBP20.01■□□□□ 0.79
SMPD1-203ENST00000527275 DGKIO75912 1065 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 AMHP03971 560 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 H2AFXP16104 143 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-203ENST00000527275 PNPLA4P41247 253 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 TAF6P49848 677 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 CDH8P55286 799 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 CKAP4Q07065 602 aaKnown RBP20.01■□□□□ 0.79
SMPD1-203ENST00000527275 FAM117BQ6P1L5 589 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 ZNF560Q96MR9 790 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 HYOU1Q9Y4L1 999 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 TBKBP1A7MCY6 615 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 CYP26A1O43174 497 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 B3GAT3O94766 335 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 TCP1P17987 556 aaKnown RBP20.01■□□□□ 0.79
SMPD1-203ENST00000527275 CD58P19256 250 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 ACO1P21399 889 aaKnown RBP20.01■□□□□ 0.79
SMPD1-203ENST00000527275 TNNC1P63316 161 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 OSBPL9Q96SU4 736 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms