RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 EVLQ9UI08 416 aaPredicted RBP17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 GCN1Q92616 2671 aaKnown RBP17.73■□□□□ 0.43
CHMP4A-203ENST00000527154 UPK3BL1B0FP48 263 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 UPK3BL2E5RIL1 263 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 K7ERI5 159 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 EPB41L2O43491 1005 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 CTDNEP1O95476 244 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 OR4Q2P0C623 313 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 LIG1P18858 919 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 ZBTB6Q15916 424 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 ZNF568Q3ZCX4 644 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 C11orf74Q86VG3 221 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 RASSF3Q86WH2 238 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 TTC9BQ8N6N2 239 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 IFT74Q96LB3 600 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 PGLYRP2Q96PD5 576 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 SLC46A2Q9BY10 475 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 GKN1Q9NS71 199 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 THG1LQ9NWX6 298 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 ABCA7Q8IZY2 2146 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 CITO14578 2027 aa17.72■□□□□ 0.43
CHMP4A-203ENST00000527154 APBB3O95704 486 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 TYMPP19971 482 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 KRT2P35908 639 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 ALDH1A3P47895 512 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 OSTNP61366 133 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 ARHGAP15Q53QZ3 475 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 PIP4P1Q86T03 277 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 ATAD1Q8NBU5 361 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 RIN3Q8TB24 985 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 MRPL4Q9BYD3 311 aaKnown RBP17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 TUBGCP4Q9UGJ1 667 aa17.71■□□□□ 0.43
CHMP4A-203ENST00000527154 ARHGEF35A5YM69 484 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 KHNYNO15037 678 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 LARGE1O95461 756 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 FDPSP14324 419 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 CDC25CP30307 473 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 NPTX2P47972 431 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 STK3Q13188 491 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 SOWAHCQ53LP3 525 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 MPZL3Q6UWV2 235 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 TMEM150AQ86TG1 271 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 ITIH5Q86UX2 942 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 SKAP1Q86WV1 359 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 PROSER1Q86XN7 944 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 CMTM8Q8IZV2 173 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 DAW1Q8N136 415 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 LARP6Q9BRS8 491 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 TARS2Q9BW92 718 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 ASH1LQ9NR48 2969 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 SLC27A5Q9Y2P5 690 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 GPSM3Q9Y4H4 160 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 IGSF10Q6WRI0 2623 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 ATG2BQ96BY7 2078 aa17.7■□□□□ 0.42
CHMP4A-203ENST00000527154 FLNBO75369 2602 aaKnown RBP17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 CELSR3Q9NYQ7 3312 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 PATE3B3GLJ2 98 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 HYAL3O43820 417 aaPredicted RBP17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 ATF6P18850 670 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 CYP3A5P20815 502 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 MARCKSP29966 332 aaPredicted RBP17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 GALK1P51570 392 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 IRX4P78413 519 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 CYP4F8P98187 520 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 DMC1Q14565 340 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 DEFB124Q8NES8 71 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 EBF3Q9H4W6 596 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 KLK13Q9UKR3 277 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 TIMM13Q9Y5L4 95 aaPredicted RBP17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 KIAA1549LQ6ZVL6 1849 aa17.69■□□□□ 0.42
CHMP4A-203ENST00000527154 TTC26A0AVF1 554 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 PFKFB2O60825 505 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 GJA4P35212 333 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 AMPD2Q01433 879 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 ECM1Q16610 540 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 NAIF1Q69YI7 327 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 TRIM68Q6AZZ1 485 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 TMEM130Q8N3G9 435 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 RPLP0P6Q8NHW5 317 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 OLIG1Q8TAK6 271 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 USP13Q92995 863 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 ACDQ96AP0 544 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 P2RY13Q9BPV8 354 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 NTPCRQ9BSD7 190 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 SMG9Q9H0W8 520 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 KIF9Q9HAQ2 790 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 PLEKHA5Q9HAU0 1116 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 POLD4Q9HCU8 107 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 CCL26Q9Y258 94 aa17.68■□□□□ 0.42
CHMP4A-203ENST00000527154 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
CHMP4A-203ENST00000527154 SOAT2O75908 522 aa17.67■□□□□ 0.42
CHMP4A-203ENST00000527154 SEMA3BQ13214 749 aa17.67■□□□□ 0.42
CHMP4A-203ENST00000527154 ZNF268Q14587 947 aaPredicted RBP17.67■□□□□ 0.42
CHMP4A-203ENST00000527154 PEAR1Q5VY43 1037 aaPredicted RBP17.67■□□□□ 0.42
CHMP4A-203ENST00000527154 LPIN3Q9BQK8 851 aa17.67■□□□□ 0.42
CHMP4A-203ENST00000527154 ORC3Q9UBD5 711 aaPredicted RBP17.67■□□□□ 0.42
CHMP4A-203ENST00000527154 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms