RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 TTYH1Q9H313 450 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-205ENST00000526954 SMYD3Q9H7B4 428 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 UBE2TQ9NPD8 197 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-205ENST00000526954 NGRNQ9NPE2 291 aaKnown RBP17.68■□□□□ 0.42
CAPN1-205ENST00000526954 IRAK3Q9Y616 596 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 ATG2AQ2TAZ0 1938 aa17.68■□□□□ 0.42
CAPN1-205ENST00000526954 GOLGA6L3A6NEY3 463 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 H7C4K7 107 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 TBC1D4O60343 1298 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 LPXNO60711 386 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 URODP06132 367 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 WEE2P0C1S8 567 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 UCHL3P15374 230 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 MFAP3P55082 362 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 CDH8P55286 799 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 ERVFC1P60507 584 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 YWHAEP62258 255 aaKnown RBP17.67■□□□□ 0.42
CAPN1-205ENST00000526954 INCA1Q0VD86 236 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 HABP4Q5JVS0 413 aaKnown RBP17.67■□□□□ 0.42
CAPN1-205ENST00000526954 SCARA5Q6ZMJ2 495 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 RRAGAQ7L523 313 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 UBR7Q8N806 425 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 NEK11Q8NG66 645 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 PCMTD1Q96MG8 357 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-205ENST00000526954 KREMEN1Q96MU8 473 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 ARID3AQ99856 593 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 MRPL45Q9BRJ2 306 aaKnown RBP17.67■□□□□ 0.42
CAPN1-205ENST00000526954 NAA15Q9BXJ9 866 aaKnown RBP17.67■□□□□ 0.42
CAPN1-205ENST00000526954 MRPL17Q9NRX2 175 aaKnown RBP17.67■□□□□ 0.42
CAPN1-205ENST00000526954 FAM207AQ9NSI2 230 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-205ENST00000526954 DNAJC12Q9UKB3 198 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 BACE2Q9Y5Z0 518 aa17.67■□□□□ 0.42
CAPN1-205ENST00000526954 EPHB6O15197 1021 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 GNL1P36915 607 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-205ENST00000526954 RAP1GAPP47736 663 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 CREMQ03060 361 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
CAPN1-205ENST00000526954 PTPN14Q15678 1187 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 FIGNQ5HY92 759 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 IQCEQ6IPM2 695 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 ZNF280DQ6N043 979 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 GJB7Q6PEY0 223 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 TMC7Q7Z402 723 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 UNC93AQ86WB7 457 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 OSTM1Q86WC4 334 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 THEM5Q8N1Q8 247 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 MRPL43Q8N983 215 aaKnown RBP17.66■□□□□ 0.42
CAPN1-205ENST00000526954 RIN2Q8WYP3 895 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-205ENST00000526954 KAT5Q92993 513 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 MRFAP1L1Q96HT8 127 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 LRCH3Q96II8 777 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 TCF25Q9BQ70 676 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 RTP3Q9BQQ7 232 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 SNX25Q9H3E2 840 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 RXFP1Q9HBX9 757 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.66■□□□□ 0.42
CAPN1-205ENST00000526954 CISHQ9NSE2 258 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 DDX43Q9NXZ2 648 aaKnown RBP17.66■□□□□ 0.42
CAPN1-205ENST00000526954 FNIP2Q9P278 1114 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 MTRRQ9UBK8 725 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 BARX2Q9UMQ3 279 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-205ENST00000526954 ITIH6Q6UXX5 1313 aa17.66■□□□□ 0.42
CAPN1-205ENST00000526954 TRANK1O15050 2925 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 OR6C75A6NL08 312 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 CILPO75339 1184 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 CXCL14O95715 111 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 ACO1P21399 889 aaKnown RBP17.65■□□□□ 0.42
CAPN1-205ENST00000526954 ZNF75DP51815 510 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 PSMD5Q16401 504 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 PTPN21Q16825 1174 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 PTPROQ16827 1216 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 ZNF697Q5TEC3 545 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 PRSS55Q6UWB4 352 aaPredicted RBP17.65■□□□□ 0.42
CAPN1-205ENST00000526954 GDPD5Q8WTR4 605 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 SHC3Q92529 594 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 IQCDQ96DY2 449 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 ACBD6Q9BR61 282 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 NUP58Q9BVL2 599 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 GRPEL1Q9HAV7 217 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 ENTPD7Q9NQZ7 604 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 LMCD1Q9NZU5 365 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 AJAP1Q9UKB5 411 aaPredicted RBP17.65■□□□□ 0.42
CAPN1-205ENST00000526954 CNTN6Q9UQ52 1028 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 STXBP5LQ9Y2K9 1186 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 NME7Q9Y5B8 376 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 FHOD1Q9Y613 1164 aa17.65■□□□□ 0.42
CAPN1-205ENST00000526954 RFXAPO00287 272 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 C2CD2LO14523 706 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 LMO2P25791 158 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 PCSK1P29120 753 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 POLR2FP61218 127 aaKnown RBP17.64■□□□□ 0.41
CAPN1-205ENST00000526954 CTXN3Q4LDR2 81 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 VSTM4Q8IW00 320 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 OR6B3Q8NGW1 331 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 WHAMMQ8TF30 809 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 AUTS2Q8WXX7 1259 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 MRPL38Q96DV4 380 aaKnown RBP17.64■□□□□ 0.41
CAPN1-205ENST00000526954 STK33Q9BYT3 514 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 EDEM3Q9BZQ6 932 aa17.64■□□□□ 0.41
CAPN1-205ENST00000526954 TTYH3Q9C0H2 523 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms