RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 C1orf50Q9BV19 199 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 COPG2Q9UBF2 871 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 RFX7Q2KHR2 1363 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.92□□□□□ -0.34
FGFR1-227ENST00000526570 LGR5O75473 907 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 PDE9AO76083 593 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 FESP07332 822 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 RAB27AP51159 221 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 ABATP80404 500 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 BNC1Q01954 994 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 FMR1Q06787 632 aaKnown RBP eCLIP12.92□□□□□ -0.34
FGFR1-227ENST00000526570 DEPDC1BQ8WUY9 529 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 LY9Q9HBG7 655 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 KCND1Q9NSA2 647 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 AREL1O15033 823 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 AKR1B1P15121 316 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 GAP43P17677 238 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 NR1D2Q14995 579 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 TRIM69Q86WT6 500 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 HPS1Q92902 700 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 VPS50Q96JG6 964 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 APOL4Q9BPW4 351 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 ZWILCHQ9H900 591 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 A0A1W2PQC6 194 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 ARHGEF37A1IGU5 675 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 FOXN1O15353 648 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 MED26O95402 600 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 MYL3P08590 195 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 MCL1Q07820 350 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 IFRD2Q12894 506 aaPredicted RBP12.92□□□□□ -0.34
FGFR1-227ENST00000526570 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
FGFR1-227ENST00000526570 SCAIQ8N9R8 606 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 RNASE11Q8TAA1 199 aaKnown RBP12.92□□□□□ -0.34
FGFR1-227ENST00000526570 OTULINQ96BN8 352 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 TSSK1BQ9BXA7 367 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 TRABDQ9H4I3 376 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 JMJD4Q9H9V9 463 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 CYP39A1Q9NYL5 469 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 CEP72Q9P209 647 aa12.92□□□□□ -0.34
FGFR1-227ENST00000526570 FKBP6O75344 327 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 C16orf62Q7Z3J2 963 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 OSBPL8Q9BZF1 889 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 METTL5Q9NRN9 209 aaKnown RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 LIMA1Q9UHB6 759 aaKnown RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 FAM47DPA6NHR8 397 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 TOMM70O94826 608 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 CALB1P05937 261 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ALOX5P09917 674 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 MAPK4P31152 587 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ZNF211Q13398 564 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ALX1Q15699 326 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 CCSAPQ6IQ19 270 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 MARK2Q7KZI7 788 aaKnown RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 PPM1KQ8N3J5 372 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ACCSQ96QU6 501 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ALG13Q9NP73 1137 aaKnown RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 KLHL2O95198 593 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 CPA2P48052 419 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 GRM4Q14833 912 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ATG14Q6ZNE5 492 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 RBM12BQ8IXT5 1001 aaKnown RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 UBASH3BQ8TF42 649 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 RMDN3Q96TC7 470 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ELP3Q9H9T3 547 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 GJB4Q9NTQ9 266 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 PPLO60437 1756 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 F5H6K3 240 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 KLHL18O94889 574 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 CHEK2O96017 543 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ABL1P00519 1130 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ATP6V1C1P21283 382 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 KLRC3Q07444 240 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ITGA7Q13683 1181 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L6PQ6QN14 398 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 KLHL17Q6TDP4 642 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 METTL16Q86W50 562 aaKnown RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ZBTB8BQ8NAP8 495 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-227ENST00000526570 PCIF1Q9H4Z3 704 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 TTLL3Q9Y4R7 772 aa12.91□□□□□ -0.34
FGFR1-227ENST00000526570 ALBP02768 609 aa12.9□□□□□ -0.34
FGFR1-227ENST00000526570 AP3B2Q13367 1082 aa12.9□□□□□ -0.34
FGFR1-227ENST00000526570 EFR3AQ14156 821 aa12.9□□□□□ -0.34
FGFR1-227ENST00000526570 PFKFB3Q16875 520 aaPredicted RBP12.9□□□□□ -0.34
FGFR1-227ENST00000526570 TTMPQ5BVD1 217 aa12.9□□□□□ -0.34
FGFR1-227ENST00000526570 PASD1Q8IV76 773 aa12.9□□□□□ -0.34
FGFR1-227ENST00000526570 ABI1Q8IZP0 508 aa12.9□□□□□ -0.34
FGFR1-227ENST00000526570 VWA5AO00534 786 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms