RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-215	ENST00000525948	TAF4	O00268	1085 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	MEFV	O15553	781 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	RNF40	O75150	1001 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	CDC45	O75419	566 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	CAVIN2	O95810	425 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	SPATA31C1	P0DKV0	1188 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	GRM5	P41594	1212 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	IRX6	P78412	446 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	NR5A1	Q13285	461 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	ELF2	Q15723	593 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	TMEM196	Q5HYL7	178 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	GPR158	Q5T848	1215 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	HAUS6	Q7Z4H7	955 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	TTC9B	Q8N6N2	239 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	BEST2	Q8NFU1	509 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	BPIFB1	Q8TDL5	484 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	TBC1D32	Q96NH3	1257 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	POLD4	Q9HCU8	107 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	SLC38A7	Q9NVC3	462 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	OBP2A	Q9NY56	170 aa		11.16	□□□□□ -0.62
PUM1-215	ENST00000525948	PCNX2	A6NKB5	2137 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	PI4KA	P42356	2102 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	ADAMTS9	Q9P2N4	1935 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	HYAL3	O43820	417 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	MED24	O75448	989 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	SOAT2	O75908	522 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	EGF	P01133	1207 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	XRCC6	P12956	609 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	CEACAM1	P13688	526 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	CSRP1	P21291	193 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	GABRR2	P28476	465 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	TXK	P42681	527 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	MCM2	P49736	904 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	YARS	P54577	528 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	CYP4F8	P98187	520 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	DUSP4	Q13115	394 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	PLD1	Q13393	1074 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	ITPRIPL2	Q3MIP1	535 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	ZNF568	Q3ZCX4	644 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	NAIF1	Q69YI7	327 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	CAMKK1	Q8N5S9	505 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	DEFB124	Q8NES8	71 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	TNFRSF25	Q93038	417 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	COL26A1	Q96A83	441 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	CCDC94	Q9BW85	323 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	SMG9	Q9H0W8	520 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	ATXN3L	Q9H3M9	355 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	TMEM9B	Q9NQ34	198 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	HPS4	Q9NQG7	708 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	CNTN3	Q9P232	1028 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	TUBGCP4	Q9UGJ1	667 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	MAFF	Q9ULX9	164 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	TNFSF13B	Q9Y275	285 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	MYH11	P35749	1972 aa		11.15	□□□□□ -0.62
PUM1-215	ENST00000525948	STK36	Q9NRP7	1315 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	TCHH	Q07283	1943 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	OTOL1	A6NHN0	477 aa	Predicted RBP	11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	PATE3	B3GLJ2	98 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	CDX4	O14627	284 aa	Predicted RBP	11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	NEMF	O60524	1076 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	ATG13	O75143	517 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	RHOBTB1	O94844	696 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	KCNE1	P15382	129 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	CYP11B2	P19099	503 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	PSMA5	P28066	241 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	EPHB3	P54753	998 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	KARS	Q15046	597 aa	Known RBP	11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	TRIM68	Q6AZZ1	485 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	CPLX2	Q6PUV4	134 aa	Known RBP	11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	PADI6	Q6TGC4	694 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	CATSPER3	Q86XQ3	398 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	APPL2	Q8NEU8	664 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	PSMG2	Q969U7	264 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	ZNF274	Q96GC6	653 aa	Predicted RBP	11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	KLK13	Q9UKR3	277 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	NEUROG3	Q9Y4Z2	214 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	IGSF10	Q6WRI0	2623 aa		11.14	□□□□□ -0.63
PUM1-215	ENST00000525948	HELZ	P42694	1942 aa	Known RBP	11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	PLXND1	Q9Y4D7	1925 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	PHLPP2	Q6ZVD8	1323 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	MTMR11	A4FU01	709 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	ARHGEF35	A5YM69	484 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	ABLIM1	O14639	778 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	TRDMT1	O14717	391 aa	Known RBP	11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	HARS	P12081	509 aa	Known RBP	11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	U2AF2	P26368	475 aa	Known RBP eCLIP	11.13	□□□□□ -0.63	4e-7	■■■■□ 21.6
PUM1-215	ENST00000525948	GBP1	P32455	592 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	RPL9	P32969	192 aa	Known RBP	11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	EFNA5	P52803	228 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	YWHAH	Q04917	246 aa	Predicted RBP	11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	SCRN1	Q12765	414 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	PPP2R5A	Q15172	486 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	UAP1L1	Q3KQV9	507 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	PMS2CL	Q68D20	193 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	RUFY3	Q7L099	469 aa		11.13	□□□□□ -0.63
PUM1-215	ENST00000525948	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.13	□□□□□ -0.63

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