RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GUCY1A2P33402 732 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 ID4P47928 161 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 C21orf58P58505 322 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 CDK17Q00537 523 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 SCAPQ12770 1279 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 MPP3Q13368 585 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 MUM1Q2TAK8 710 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 SPDYE7PQ495Y7 208 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 RD3Q7Z3Z2 195 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 NOP9Q86U38 636 aaKnown RBP3.88□□□□□ -1.79
CSDE1-208ENST00000524652 MORC1Q86VD1 984 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 KCNH5Q8NCM2 988 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 REPS2Q8NFH8 660 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 LMBR1Q8WVP7 490 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 IP6K1Q92551 441 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 FATE1Q969F0 183 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 FUBP3Q96I24 572 aaKnown RBP eCLIP3.88□□□□□ -1.79
CSDE1-208ENST00000524652 R3HDMLQ9H3Y0 253 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 RNPEPQ9H4A4 650 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 PRDM13Q9H4Q3 707 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 GREM2Q9H772 168 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 PRDM11Q9NQV5 511 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 RBM12Q9NTZ6 932 aaKnown RBP3.88□□□□□ -1.79
CSDE1-208ENST00000524652 MAP3K2Q9Y2U5 619 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 MEGF6O75095 1541 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 PNPLA7Q6ZV29 1317 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 GOLGB1Q14789 3259 aaKnown RBP3.88□□□□□ -1.79
CSDE1-208ENST00000524652 INSRP06213 1382 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 FLT4P35916 1363 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 ADAMTS7Q9UKP4 1686 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 DISP2A7MBM2 1401 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 TNS1Q9HBL0 1735 aaKnown RBP3.87□□□□□ -1.79
CSDE1-208ENST00000524652 ELANEP08246 267 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 IL2RBP14784 551 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 ADSLP30566 484 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-208ENST00000524652 CXCR5P32302 372 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 SOX5P35711 763 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 SREBF1P36956 1147 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 MTHFSP49914 203 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 GYS2P54840 703 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 OCA2Q04671 838 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 FAPQ12884 760 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 STRN3Q13033 797 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 EIF4A2Q14240 407 aaKnown RBP3.87□□□□□ -1.79
CSDE1-208ENST00000524652 MUM1L1Q5H9M0 696 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 AFMIDQ63HM1 303 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 B3GNTL1Q67FW5 361 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-208ENST00000524652 MED25Q71SY5 747 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 KCNK18Q7Z418 384 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 TMEM132CQ8N3T6 1108 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 SIMC1Q8NDZ2 872 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 CASKIN2Q8WXE0 1202 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 HOXB13Q92826 284 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-208ENST00000524652 UHRF1Q96T88 793 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-208ENST00000524652 ACE2Q9BYF1 805 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-208ENST00000524652 CAAP1Q9H8G2 361 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 IFT122Q9HBG6 1241 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 ADARB2Q9NS39 739 aaKnown RBP3.87□□□□□ -1.79
CSDE1-208ENST00000524652 LANCL2Q9NS86 450 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 TMEM74BQ9NUR3 256 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 NOX1Q9Y5S8 564 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 WDR17Q8IZU2 1322 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 KIF24Q5T7B8 1368 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 RGS12O14924 1447 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 CRB1P82279 1406 aa3.87□□□□□ -1.79
CSDE1-208ENST00000524652 BTAF1O14981 1849 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 A0A1B0GTW7 788 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 PPM1GO15355 546 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-208ENST00000524652 TEX33O43247 280 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 ENDOD1O94919 500 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 ATP5JP18859 108 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 GCSHP23434 173 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 MPLP40238 635 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 IL12RB1P42701 662 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 AMPHP49418 695 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 ELLP55199 621 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-208ENST00000524652 PER3P56645 1201 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 RAP2BP61225 183 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 MALLQ13021 153 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 RALBP1Q15311 655 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 COLEC12Q5KU26 742 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 TSHZ3Q63HK5 1081 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 OTUD7BQ6GQQ9 843 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 UNC5CLQ8IV45 518 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 FAM43AQ8N2R8 423 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 PQLC1Q8N2U9 271 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 SLC44A3Q8N4M1 653 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 CAGE1Q8TC20 777 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 LTV1Q96GA3 475 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-208ENST00000524652 BOD1Q96IK1 185 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 PHACTR3Q96KR7 559 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 MRI1Q9BV20 369 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 ALOXE3Q9BYJ1 711 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 SENP6Q9GZR1 1112 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-208ENST00000524652 QRSL1Q9H0R6 528 aaKnown RBP3.86□□□□□ -1.79
CSDE1-208ENST00000524652 ALG13Q9NP73 1137 aaKnown RBP3.86□□□□□ -1.79
CSDE1-208ENST00000524652 KCNE5Q9UJ90 142 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 SPATA31A1Q5TZJ5 1347 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 SPATA31A5Q5VU36 1347 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 SPATA31A7Q8IWB4 1347 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms