RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 MAMLD1Q13495 774 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 HIC1Q14526 733 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 SLFN11Q7Z7L1 901 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 PWWP2AQ96N64 755 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 ZIM3Q96PE6 472 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 NAP1L3Q99457 506 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-216ENST00000524481 SDCBP2Q9H190 292 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 CHST7Q9NS84 486 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 GOLGA6AQ9NYA3 693 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 MROH7Q68CQ1 1323 aa12.47□□□□□ -0.41
PTPRK-216ENST00000524481 MAP2K7O14733 419 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 ZC3H11AO75152 810 aaKnown RBP eCLIP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 TRPA1O75762 1119 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 RECQL4O94761 1208 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 RFC1P35251 1148 aaPredicted RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 FSCN1Q16658 493 aaKnown RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 TXNRD3NBQ6F5E7 133 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 HASPINQ8TF76 798 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 LPPQ93052 612 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 CARD9Q9H257 536 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 MRPL47Q9HD33 250 aaKnown RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 NGRNQ9NPE2 291 aaKnown RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 ZNF148Q9UQR1 794 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 MRPL42Q9Y6G3 142 aaKnown RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 ZNFX1Q9P2E3 1918 aaKnown RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 GOLGA6L10A6NI86 522 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 SLC15A5A6NIM6 579 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 MEIS3P2A8K0S8 358 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 A8MXQ7 604 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 KRT1P04264 644 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 KRT3P12035 628 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 EIF4BP23588 611 aaKnown RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 ACAT1P24752 427 aaKnown RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 ADCY8P40145 1251 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 SURF1Q15526 300 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 CCDC142Q17RM4 750 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 FAM102AQ5T9C2 384 aaPredicted RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 RASAL3Q86YV0 1011 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 IFNL1Q8IU54 200 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 SCUBE3Q8IX30 993 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 ZDHHC14Q8IZN3 488 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 ZMAT2Q96NC0 199 aaKnown RBP12.46□□□□□ -0.41
PTPRK-216ENST00000524481 PLVAPQ9BX97 442 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 UVRAGQ9P2Y5 699 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 MORF4L1Q9UBU8 362 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 PLAAQ9Y263 795 aa12.46□□□□□ -0.41
PTPRK-216ENST00000524481 MIF4GDA9UHW6 222 aaKnown RBP12.46□□□□□ -0.42
PTPRK-216ENST00000524481 PIGRP01833 764 aa12.46□□□□□ -0.42
PTPRK-216ENST00000524481 PSEN2P49810 448 aa12.46□□□□□ -0.42
PTPRK-216ENST00000524481 CDCA2Q69YH5 1023 aaPredicted RBP12.46□□□□□ -0.42
PTPRK-216ENST00000524481 SLC13A5Q86YT5 568 aaPredicted RBP12.46□□□□□ -0.42
PTPRK-216ENST00000524481 PRELID2Q8N945 189 aa12.46□□□□□ -0.42
PTPRK-216ENST00000524481 FEZF2Q8TBJ5 459 aa12.46□□□□□ -0.42
PTPRK-216ENST00000524481 FBXO25Q8TCJ0 367 aa12.46□□□□□ -0.42
PTPRK-216ENST00000524481 GTF3C2Q8WUA4 911 aaPredicted RBP12.46□□□□□ -0.42
PTPRK-216ENST00000524481 WNT8AQ9H1J5 351 aa12.46□□□□□ -0.42
PTPRK-216ENST00000524481 METTL5Q9NRN9 209 aaKnown RBP12.46□□□□□ -0.42
PTPRK-216ENST00000524481 PARVAQ9NVD7 372 aa12.46□□□□□ -0.42
PTPRK-216ENST00000524481 CCDC66A2RUB6 948 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 TULP2O00295 520 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 JAMLQ86YT9 394 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 JOSD2Q8TAC2 188 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 NCANO14594 1321 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 CYP1A2P05177 515 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 IGFBP6P24592 240 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-216ENST00000524481 RGS2P41220 211 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 FKBP1BP68106 108 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 MYO1EQ12965 1108 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 TAF5Q15542 800 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 ZNF618Q5T7W0 954 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 TTC27Q6P3X3 843 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 HERPUD2Q9BSE4 406 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 B3GNT5Q9BYG0 378 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 XYLT2Q9H1B5 865 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 PCDH10Q9P2E7 1040 aa12.45□□□□□ -0.42
PTPRK-216ENST00000524481 R3HDM2Q9Y2K5 976 aaKnown RBP12.45□□□□□ -0.42
PTPRK-216ENST00000524481 MANSC4A6NHS7 340 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ANKRD65E5RJM6 399 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 CCDC188H7C350 402 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 I3L4J1 428 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 FAM189A1O60320 539 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 LCP1P13796 627 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 CETN2P41208 172 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ASPAP45381 313 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 RBP5P82980 135 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 CALCOCO2Q13137 446 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 SH3PXD2AQ5TCZ1 1133 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 AENQ8WTP8 325 aaKnown RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 NDRG1Q92597 394 aaKnown RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 KAT2BQ92831 832 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 FAM149B1Q96BN6 582 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 CPXM1Q96SM3 734 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 FMO2Q99518 471 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ELOVL4Q9GZR5 314 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 PTPRHQ9HD43 1115 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 NENFQ9UMX5 172 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 F5H423 210 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms